Gene : Carub.0005s2426 C. rubella v1.1
Defline:  (1 of 2) PTHR31362:SF1 - EXPRESSED PROTEIN Genomic Order:  2426
Name:  ? Carub.0005s2426 Secondary Identifier:  ? PAC:39225360
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2426 0.5kb upstream 0.5kb upstream 3277 true scaffold_5: 11532628-11535904 Capsella rubella
Carub.0005s2426 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11535405-11535904 Capsella rubella
Carub.0005s2426 0.5kb downstream 0.5kb downstream 3277 true scaffold_5: 11532128-11535404 Capsella rubella
Carub.0005s2426 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11532128-11532627 Capsella rubella
Carub.0005s2426 1.0kb upstream 1.0kb upstream 3777 true scaffold_5: 11532628-11536404 Capsella rubella
Carub.0005s2426 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11535405-11536404 Capsella rubella
Carub.0005s2426 1.0kb downstream 1.0kb downstream 3777 true scaffold_5: 11531628-11535404 Capsella rubella
Carub.0005s2426 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11531628-11532627 Capsella rubella
Carub.0005s2426 2.0kb upstream 2.0kb upstream 4777 true scaffold_5: 11532628-11537404 Capsella rubella
Carub.0005s2426 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11535405-11537404 Capsella rubella
Carub.0005s2426 2.0kb downstream 2.0kb downstream 4777 true scaffold_5: 11530628-11535404 Capsella rubella
Carub.0005s2426 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11530628-11532627 Capsella rubella
Carub.0005s2426 5.0kb upstream 5.0kb upstream 7777 true scaffold_5: 11532628-11540404 Capsella rubella
Carub.0005s2426 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11535405-11540404 Capsella rubella
Carub.0005s2426 5.0kb downstream 5.0kb downstream 7777 true scaffold_5: 11527628-11535404 Capsella rubella
Carub.0005s2426 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11527628-11532627 Capsella rubella
Carub.0005s2426 10.0kb upstream 10.0kb upstream 12777 true scaffold_5: 11532628-11545404 Capsella rubella
Carub.0005s2426 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11535405-11545404 Capsella rubella
Carub.0005s2426 10.0kb downstream 10.0kb downstream 12777 true scaffold_5: 11522628-11535404 Capsella rubella
Carub.0005s2426 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11522628-11532627 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377946 5261 Brassicaceae View MSA
123836210 5264 Brassicales-Malvales View MSA
124337642 5266 SBM View MSA
124245745 5268 Malvidae View MSA
124061899 5270 Rosid View MSA
123745860 5271 Pentapetalae View MSA
122790423 5272 Eudicot View MSA
122044910 5273 Angiosperm View MSA
121350104 5274 Embryophyte View MSA
123426431 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain