Gene : Carub.0005s2447 C. rubella v1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF21 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  2447
Name:  ? Carub.0005s2447 Secondary Identifier:  ? PAC:39224329
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2447 0.5kb upstream 0.5kb upstream 4399 true scaffold_5: 11616846-11621244 Capsella rubella
Carub.0005s2447 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11620745-11621244 Capsella rubella
Carub.0005s2447 0.5kb downstream 0.5kb downstream 4399 true scaffold_5: 11616346-11620744 Capsella rubella
Carub.0005s2447 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11616346-11616845 Capsella rubella
Carub.0005s2447 1.0kb upstream 1.0kb upstream 4899 true scaffold_5: 11616846-11621744 Capsella rubella
Carub.0005s2447 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11620745-11621744 Capsella rubella
Carub.0005s2447 1.0kb downstream 1.0kb downstream 4899 true scaffold_5: 11615846-11620744 Capsella rubella
Carub.0005s2447 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11615846-11616845 Capsella rubella
Carub.0005s2447 2.0kb upstream 2.0kb upstream 5899 true scaffold_5: 11616846-11622744 Capsella rubella
Carub.0005s2447 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11620745-11622744 Capsella rubella
Carub.0005s2447 2.0kb downstream 2.0kb downstream 5899 true scaffold_5: 11614846-11620744 Capsella rubella
Carub.0005s2447 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11614846-11616845 Capsella rubella
Carub.0005s2447 5.0kb upstream 5.0kb upstream 8899 true scaffold_5: 11616846-11625744 Capsella rubella
Carub.0005s2447 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11620745-11625744 Capsella rubella
Carub.0005s2447 5.0kb downstream 5.0kb downstream 8899 true scaffold_5: 11611846-11620744 Capsella rubella
Carub.0005s2447 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11611846-11616845 Capsella rubella
Carub.0005s2447 10.0kb upstream 10.0kb upstream 13899 true scaffold_5: 11616846-11630744 Capsella rubella
Carub.0005s2447 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11620745-11630744 Capsella rubella
Carub.0005s2447 10.0kb downstream 10.0kb downstream 13899 true scaffold_5: 11606846-11620744 Capsella rubella
Carub.0005s2447 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11606846-11616845 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362976 5261 Brassicaceae View MSA
123828108 5264 Brassicales-Malvales View MSA
124336419 5266 SBM View MSA
124238269 5268 Malvidae View MSA
124062411 5270 Rosid View MSA
123741166 5271 Pentapetalae View MSA
122787987 5272 Eudicot View MSA
122046207 5273 Angiosperm View MSA
121347306 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain