Gene : Carub.0005s2289 C. rubella v1.1
Defline:  (1 of 2) PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Genomic Order:  2289
Name:  ? Carub.0005s2289 Secondary Identifier:  ? PAC:39225790
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2289 0.5kb upstream 0.5kb upstream 4059 true scaffold_5: 11056919-11060977 Capsella rubella
Carub.0005s2289 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11056919-11057418 Capsella rubella
Carub.0005s2289 0.5kb downstream 0.5kb downstream 4059 true scaffold_5: 11057419-11061477 Capsella rubella
Carub.0005s2289 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11060978-11061477 Capsella rubella
Carub.0005s2289 1.0kb upstream 1.0kb upstream 4559 true scaffold_5: 11056419-11060977 Capsella rubella
Carub.0005s2289 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11056419-11057418 Capsella rubella
Carub.0005s2289 1.0kb downstream 1.0kb downstream 4559 true scaffold_5: 11057419-11061977 Capsella rubella
Carub.0005s2289 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11060978-11061977 Capsella rubella
Carub.0005s2289 2.0kb upstream 2.0kb upstream 5559 true scaffold_5: 11055419-11060977 Capsella rubella
Carub.0005s2289 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11055419-11057418 Capsella rubella
Carub.0005s2289 2.0kb downstream 2.0kb downstream 5559 true scaffold_5: 11057419-11062977 Capsella rubella
Carub.0005s2289 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11060978-11062977 Capsella rubella
Carub.0005s2289 5.0kb upstream 5.0kb upstream 8559 true scaffold_5: 11052419-11060977 Capsella rubella
Carub.0005s2289 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11052419-11057418 Capsella rubella
Carub.0005s2289 5.0kb downstream 5.0kb downstream 8559 true scaffold_5: 11057419-11065977 Capsella rubella
Carub.0005s2289 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11060978-11065977 Capsella rubella
Carub.0005s2289 10.0kb upstream 10.0kb upstream 13559 true scaffold_5: 11047419-11060977 Capsella rubella
Carub.0005s2289 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11047419-11057418 Capsella rubella
Carub.0005s2289 10.0kb downstream 10.0kb downstream 13559 true scaffold_5: 11057419-11070977 Capsella rubella
Carub.0005s2289 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11060978-11070977 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371560 5261 Brassicaceae View MSA
123829237 5264 Brassicales-Malvales View MSA
124336469 5266 SBM View MSA
124241141 5268 Malvidae View MSA
124063708 5270 Rosid View MSA
123737054 5271 Pentapetalae View MSA
122790914 5272 Eudicot View MSA
122041668 5273 Angiosperm View MSA
121345431 5274 Embryophyte View MSA
123380215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain