Gene : Carub.0001s4414 C. rubella v1.1
Defline:  (1 of 1) PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F Genomic Order:  4414
Name:  ? Carub.0001s4414 Secondary Identifier:  ? PAC:39230566
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4414 0.5kb upstream 0.5kb upstream 4600 true scaffold_1: 19340297-19344896 Capsella rubella
Carub.0001s4414 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 19344397-19344896 Capsella rubella
Carub.0001s4414 0.5kb downstream 0.5kb downstream 4600 true scaffold_1: 19339797-19344396 Capsella rubella
Carub.0001s4414 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 19339797-19340296 Capsella rubella
Carub.0001s4414 1.0kb upstream 1.0kb upstream 5100 true scaffold_1: 19340297-19345396 Capsella rubella
Carub.0001s4414 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 19344397-19345396 Capsella rubella
Carub.0001s4414 1.0kb downstream 1.0kb downstream 5100 true scaffold_1: 19339297-19344396 Capsella rubella
Carub.0001s4414 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 19339297-19340296 Capsella rubella
Carub.0001s4414 2.0kb upstream 2.0kb upstream 6100 true scaffold_1: 19340297-19346396 Capsella rubella
Carub.0001s4414 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 19344397-19346396 Capsella rubella
Carub.0001s4414 2.0kb downstream 2.0kb downstream 6100 true scaffold_1: 19338297-19344396 Capsella rubella
Carub.0001s4414 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 19338297-19340296 Capsella rubella
Carub.0001s4414 5.0kb upstream 5.0kb upstream 9100 true scaffold_1: 19340297-19349396 Capsella rubella
Carub.0001s4414 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 19344397-19349396 Capsella rubella
Carub.0001s4414 5.0kb downstream 5.0kb downstream 9100 true scaffold_1: 19335297-19344396 Capsella rubella
Carub.0001s4414 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 19335297-19340296 Capsella rubella
Carub.0001s4414 10.0kb upstream 10.0kb upstream 14100 true scaffold_1: 19340297-19354396 Capsella rubella
Carub.0001s4414 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 19344397-19354396 Capsella rubella
Carub.0001s4414 10.0kb downstream 10.0kb downstream 14100 true scaffold_1: 19330297-19344396 Capsella rubella
Carub.0001s4414 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 19330297-19340296 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377271 5261 Brassicaceae View MSA
123828322 5264 Brassicales-Malvales View MSA
124342569 5266 SBM View MSA
124252989 5268 Malvidae View MSA
124064511 5270 Rosid View MSA
123748133 5271 Pentapetalae View MSA
122793511 5272 Eudicot View MSA
122047702 5273 Angiosperm View MSA
121347705 5274 Embryophyte View MSA
123427001 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain