Gene : Carub.0001s4482 C. rubella v1.1
Defline:  (1 of 1) PTHR11384:SF3 - INNER MEMBRANE ABC TRANSPORTER ATP-BINDING PROTEIN YDDA-RELATED Genomic Order:  4482
Name:  ? Carub.0001s4482 Secondary Identifier:  ? PAC:39228064
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4482 0.5kb upstream 0.5kb upstream 4649 true scaffold_1: 19583289-19587937 Capsella rubella
Carub.0001s4482 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 19587438-19587937 Capsella rubella
Carub.0001s4482 0.5kb downstream 0.5kb downstream 4649 true scaffold_1: 19582789-19587437 Capsella rubella
Carub.0001s4482 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 19582789-19583288 Capsella rubella
Carub.0001s4482 1.0kb upstream 1.0kb upstream 5149 true scaffold_1: 19583289-19588437 Capsella rubella
Carub.0001s4482 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 19587438-19588437 Capsella rubella
Carub.0001s4482 1.0kb downstream 1.0kb downstream 5149 true scaffold_1: 19582289-19587437 Capsella rubella
Carub.0001s4482 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 19582289-19583288 Capsella rubella
Carub.0001s4482 2.0kb upstream 2.0kb upstream 6149 true scaffold_1: 19583289-19589437 Capsella rubella
Carub.0001s4482 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 19587438-19589437 Capsella rubella
Carub.0001s4482 2.0kb downstream 2.0kb downstream 6149 true scaffold_1: 19581289-19587437 Capsella rubella
Carub.0001s4482 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 19581289-19583288 Capsella rubella
Carub.0001s4482 5.0kb upstream 5.0kb upstream 9149 true scaffold_1: 19583289-19592437 Capsella rubella
Carub.0001s4482 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 19587438-19592437 Capsella rubella
Carub.0001s4482 5.0kb downstream 5.0kb downstream 9149 true scaffold_1: 19578289-19587437 Capsella rubella
Carub.0001s4482 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 19578289-19583288 Capsella rubella
Carub.0001s4482 10.0kb upstream 10.0kb upstream 14149 true scaffold_1: 19583289-19597437 Capsella rubella
Carub.0001s4482 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 19587438-19597437 Capsella rubella
Carub.0001s4482 10.0kb downstream 10.0kb downstream 14149 true scaffold_1: 19573289-19587437 Capsella rubella
Carub.0001s4482 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 19573289-19583288 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367365 5261 Brassicaceae View MSA
123828632 5264 Brassicales-Malvales View MSA
124338730 5266 SBM View MSA
124243708 5268 Malvidae View MSA
124064537 5270 Rosid View MSA
123737763 5271 Pentapetalae View MSA
122786409 5272 Eudicot View MSA
122041976 5273 Angiosperm View MSA
121349377 5274 Embryophyte View MSA
123427476 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain