Gene : Carub.0001s4170 C. rubella v1.1
Defline:  (1 of 6) K06130 - lysophospholipase II (LYPLA2) Genomic Order:  4170
Name:  ? Carub.0001s4170 Secondary Identifier:  ? PAC:39229982
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7409 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4170 0.5kb upstream 0.5kb upstream 8983 true scaffold_1: 18388970-18397952 Capsella rubella
Carub.0001s4170 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 18397453-18397952 Capsella rubella
Carub.0001s4170 0.5kb downstream 0.5kb downstream 8983 true scaffold_1: 18388470-18397452 Capsella rubella
Carub.0001s4170 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 18388470-18388969 Capsella rubella
Carub.0001s4170 1.0kb upstream 1.0kb upstream 9483 true scaffold_1: 18388970-18398452 Capsella rubella
Carub.0001s4170 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 18397453-18398452 Capsella rubella
Carub.0001s4170 1.0kb downstream 1.0kb downstream 9483 true scaffold_1: 18387970-18397452 Capsella rubella
Carub.0001s4170 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 18387970-18388969 Capsella rubella
Carub.0001s4170 2.0kb upstream 2.0kb upstream 10483 true scaffold_1: 18388970-18399452 Capsella rubella
Carub.0001s4170 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 18397453-18399452 Capsella rubella
Carub.0001s4170 2.0kb downstream 2.0kb downstream 10483 true scaffold_1: 18386970-18397452 Capsella rubella
Carub.0001s4170 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 18386970-18388969 Capsella rubella
Carub.0001s4170 5.0kb upstream 5.0kb upstream 13483 true scaffold_1: 18388970-18402452 Capsella rubella
Carub.0001s4170 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 18397453-18402452 Capsella rubella
Carub.0001s4170 5.0kb downstream 5.0kb downstream 13483 true scaffold_1: 18383970-18397452 Capsella rubella
Carub.0001s4170 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 18383970-18388969 Capsella rubella
Carub.0001s4170 10.0kb upstream 10.0kb upstream 18483 true scaffold_1: 18388970-18407452 Capsella rubella
Carub.0001s4170 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 18397453-18407452 Capsella rubella
Carub.0001s4170 10.0kb downstream 10.0kb downstream 18483 true scaffold_1: 18378970-18397452 Capsella rubella
Carub.0001s4170 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 18378970-18388969 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362714 5261 Brassicaceae View MSA
123842121 5264 Brassicales-Malvales View MSA
124351900 5266 SBM View MSA
124247684 5268 Malvidae View MSA
124070848 5270 Rosid View MSA
123747021 5271 Pentapetalae View MSA
122795492 5272 Eudicot View MSA
122046747 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain