Gene : Carub.0001s4197 C. rubella v1.1
Defline:  (1 of 3) PTHR31734:SF12 - AUXIN-RESPONSIVE PROTEIN IAA19-RELATED Genomic Order:  4197
Name:  ? Carub.0001s4197 Secondary Identifier:  ? PAC:39227520
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4197 0.5kb upstream 0.5kb upstream 1789 true scaffold_1: 18497616-18499404 Capsella rubella
Carub.0001s4197 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 18498905-18499404 Capsella rubella
Carub.0001s4197 0.5kb downstream 0.5kb downstream 1789 true scaffold_1: 18497116-18498904 Capsella rubella
Carub.0001s4197 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 18497116-18497615 Capsella rubella
Carub.0001s4197 1.0kb upstream 1.0kb upstream 2289 true scaffold_1: 18497616-18499904 Capsella rubella
Carub.0001s4197 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 18498905-18499904 Capsella rubella
Carub.0001s4197 1.0kb downstream 1.0kb downstream 2289 true scaffold_1: 18496616-18498904 Capsella rubella
Carub.0001s4197 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 18496616-18497615 Capsella rubella
Carub.0001s4197 2.0kb upstream 2.0kb upstream 3289 true scaffold_1: 18497616-18500904 Capsella rubella
Carub.0001s4197 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 18498905-18500904 Capsella rubella
Carub.0001s4197 2.0kb downstream 2.0kb downstream 3289 true scaffold_1: 18495616-18498904 Capsella rubella
Carub.0001s4197 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 18495616-18497615 Capsella rubella
Carub.0001s4197 5.0kb upstream 5.0kb upstream 6289 true scaffold_1: 18497616-18503904 Capsella rubella
Carub.0001s4197 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 18498905-18503904 Capsella rubella
Carub.0001s4197 5.0kb downstream 5.0kb downstream 6289 true scaffold_1: 18492616-18498904 Capsella rubella
Carub.0001s4197 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 18492616-18497615 Capsella rubella
Carub.0001s4197 10.0kb upstream 10.0kb upstream 11289 true scaffold_1: 18497616-18508904 Capsella rubella
Carub.0001s4197 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 18498905-18508904 Capsella rubella
Carub.0001s4197 10.0kb downstream 10.0kb downstream 11289 true scaffold_1: 18487616-18498904 Capsella rubella
Carub.0001s4197 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 18487616-18497615 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381170 5261 Brassicaceae View MSA
123803096 5264 Brassicales-Malvales View MSA
124300231 5266 SBM View MSA
124151462 5268 Malvidae View MSA
124060642 5270 Rosid View MSA
123747255 5271 Pentapetalae View MSA
122788195 5272 Eudicot View MSA
122050292 5273 Angiosperm View MSA
121311842 5274 Embryophyte View MSA
123349083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain