Gene : Carub.0001s3804 C. rubella v1.1

Defline:  (1 of 4) K03106 - signal recognition particle subunit SRP54 (SRP54, ffh) Genomic Order:  3804
Name:  ? Carub.0001s3804 Secondary Identifier:  ? PAC:39231323

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3804 0.5kb upstream 0.5kb upstream 3392 true scaffold_1: 16768571-16771962 Capsella rubella
Carub.0001s3804 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 16771463-16771962 Capsella rubella
Carub.0001s3804 0.5kb downstream 0.5kb downstream 3392 true scaffold_1: 16768071-16771462 Capsella rubella
Carub.0001s3804 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 16768071-16768570 Capsella rubella
Carub.0001s3804 1.0kb upstream 1.0kb upstream 3892 true scaffold_1: 16768571-16772462 Capsella rubella
Carub.0001s3804 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 16771463-16772462 Capsella rubella
Carub.0001s3804 1.0kb downstream 1.0kb downstream 3892 true scaffold_1: 16767571-16771462 Capsella rubella
Carub.0001s3804 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 16767571-16768570 Capsella rubella
Carub.0001s3804 2.0kb upstream 2.0kb upstream 4892 true scaffold_1: 16768571-16773462 Capsella rubella
Carub.0001s3804 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 16771463-16773462 Capsella rubella
Carub.0001s3804 2.0kb downstream 2.0kb downstream 4892 true scaffold_1: 16766571-16771462 Capsella rubella
Carub.0001s3804 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 16766571-16768570 Capsella rubella
Carub.0001s3804 5.0kb upstream 5.0kb upstream 7892 true scaffold_1: 16768571-16776462 Capsella rubella
Carub.0001s3804 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 16771463-16776462 Capsella rubella
Carub.0001s3804 5.0kb downstream 5.0kb downstream 7892 true scaffold_1: 16763571-16771462 Capsella rubella
Carub.0001s3804 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 16763571-16768570 Capsella rubella
Carub.0001s3804 10.0kb upstream 10.0kb upstream 12892 true scaffold_1: 16768571-16781462 Capsella rubella
Carub.0001s3804 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 16771463-16781462 Capsella rubella
Carub.0001s3804 10.0kb downstream 10.0kb downstream 12892 true scaffold_1: 16758571-16771462 Capsella rubella
Carub.0001s3804 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 16758571-16768570 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373551 5261 Brassicaceae View MSA
123828989 5264 Brassicales-Malvales View MSA
124345688 5266 SBM View MSA
124243427 5268 Malvidae View MSA
124067958 5270 Rosid View MSA
123743632 5271 Pentapetalae View MSA
122786990 5272 Eudicot View MSA
122048939 5273 Angiosperm View MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain