Gene : Carub.0005s2746 C. rubella v1.1
Defline:  (1 of 1) PTHR31707//PTHR31707:SF35 - FAMILY NOT NAMED // PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED Genomic Order:  2746
Name:  ? Carub.0005s2746 Secondary Identifier:  ? PAC:39224944
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1081 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2746 0.5kb upstream 0.5kb upstream 2597 true scaffold_5: 12731691-12734287 Capsella rubella
Carub.0005s2746 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 12731691-12732190 Capsella rubella
Carub.0005s2746 0.5kb downstream 0.5kb downstream 2597 true scaffold_5: 12732191-12734787 Capsella rubella
Carub.0005s2746 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 12734288-12734787 Capsella rubella
Carub.0005s2746 1.0kb upstream 1.0kb upstream 3097 true scaffold_5: 12731191-12734287 Capsella rubella
Carub.0005s2746 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 12731191-12732190 Capsella rubella
Carub.0005s2746 1.0kb downstream 1.0kb downstream 3097 true scaffold_5: 12732191-12735287 Capsella rubella
Carub.0005s2746 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 12734288-12735287 Capsella rubella
Carub.0005s2746 2.0kb upstream 2.0kb upstream 4097 true scaffold_5: 12730191-12734287 Capsella rubella
Carub.0005s2746 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 12730191-12732190 Capsella rubella
Carub.0005s2746 2.0kb downstream 2.0kb downstream 4097 true scaffold_5: 12732191-12736287 Capsella rubella
Carub.0005s2746 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 12734288-12736287 Capsella rubella
Carub.0005s2746 5.0kb upstream 5.0kb upstream 7097 true scaffold_5: 12727191-12734287 Capsella rubella
Carub.0005s2746 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 12727191-12732190 Capsella rubella
Carub.0005s2746 5.0kb downstream 5.0kb downstream 7097 true scaffold_5: 12732191-12739287 Capsella rubella
Carub.0005s2746 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 12734288-12739287 Capsella rubella
Carub.0005s2746 10.0kb upstream 10.0kb upstream 12097 true scaffold_5: 12722191-12734287 Capsella rubella
Carub.0005s2746 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 12722191-12732190 Capsella rubella
Carub.0005s2746 10.0kb downstream 10.0kb downstream 12097 true scaffold_5: 12732191-12744287 Capsella rubella
Carub.0005s2746 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 12734288-12744287 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367115 5261 Brassicaceae View MSA
123829161 5264 Brassicales-Malvales View MSA
124350444 5266 SBM View MSA
124244042 5268 Malvidae View MSA
124073271 5270 Rosid View MSA
123752785 5271 Pentapetalae View MSA
122796250 5272 Eudicot View MSA
122050958 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain