Gene : Carub.0001s4007 C. rubella v1.1
Defline:  (1 of 1) PTHR23249//PTHR23249:SF16 - SYNBINDIN // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1 Genomic Order:  4007
Name:  ? Carub.0001s4007 Secondary Identifier:  ? PAC:39230921
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4007 0.5kb upstream 0.5kb upstream 2408 true scaffold_1: 17698018-17700425 Capsella rubella
Carub.0001s4007 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17698018-17698517 Capsella rubella
Carub.0001s4007 0.5kb downstream 0.5kb downstream 2408 true scaffold_1: 17698518-17700925 Capsella rubella
Carub.0001s4007 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17700426-17700925 Capsella rubella
Carub.0001s4007 1.0kb upstream 1.0kb upstream 2908 true scaffold_1: 17697518-17700425 Capsella rubella
Carub.0001s4007 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17697518-17698517 Capsella rubella
Carub.0001s4007 1.0kb downstream 1.0kb downstream 2908 true scaffold_1: 17698518-17701425 Capsella rubella
Carub.0001s4007 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17700426-17701425 Capsella rubella
Carub.0001s4007 2.0kb upstream 2.0kb upstream 3908 true scaffold_1: 17696518-17700425 Capsella rubella
Carub.0001s4007 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17696518-17698517 Capsella rubella
Carub.0001s4007 2.0kb downstream 2.0kb downstream 3908 true scaffold_1: 17698518-17702425 Capsella rubella
Carub.0001s4007 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17700426-17702425 Capsella rubella
Carub.0001s4007 5.0kb upstream 5.0kb upstream 6908 true scaffold_1: 17693518-17700425 Capsella rubella
Carub.0001s4007 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17693518-17698517 Capsella rubella
Carub.0001s4007 5.0kb downstream 5.0kb downstream 6908 true scaffold_1: 17698518-17705425 Capsella rubella
Carub.0001s4007 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17700426-17705425 Capsella rubella
Carub.0001s4007 10.0kb upstream 10.0kb upstream 11908 true scaffold_1: 17688518-17700425 Capsella rubella
Carub.0001s4007 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17688518-17698517 Capsella rubella
Carub.0001s4007 10.0kb downstream 10.0kb downstream 11908 true scaffold_1: 17698518-17710425 Capsella rubella
Carub.0001s4007 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17700426-17710425 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026490 5273 Angiosperm View MSA
122364502 5261 Brassicaceae View MSA
123832778 5264 Brassicales-Malvales View MSA
124342262 5266 SBM View MSA
124240430 5268 Malvidae View MSA
124068318 5270 Rosid View MSA
123752439 5271 Pentapetalae View MSA
122794769 5272 Eudicot View MSA
121344291 5274 Embryophyte View MSA
123427363 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain