Gene : Carub.0001s3687 C. rubella v1.1
Defline:  (1 of 37) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Genomic Order:  3687
Name:  ? Carub.0001s3687 Secondary Identifier:  ? PAC:39230810
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3687 0.5kb upstream 0.5kb upstream 2435 true scaffold_1: 16212780-16215214 Capsella rubella
Carub.0001s3687 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 16214715-16215214 Capsella rubella
Carub.0001s3687 0.5kb downstream 0.5kb downstream 2435 true scaffold_1: 16212280-16214714 Capsella rubella
Carub.0001s3687 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 16212280-16212779 Capsella rubella
Carub.0001s3687 1.0kb upstream 1.0kb upstream 2935 true scaffold_1: 16212780-16215714 Capsella rubella
Carub.0001s3687 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 16214715-16215714 Capsella rubella
Carub.0001s3687 1.0kb downstream 1.0kb downstream 2935 true scaffold_1: 16211780-16214714 Capsella rubella
Carub.0001s3687 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 16211780-16212779 Capsella rubella
Carub.0001s3687 2.0kb upstream 2.0kb upstream 3935 true scaffold_1: 16212780-16216714 Capsella rubella
Carub.0001s3687 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 16214715-16216714 Capsella rubella
Carub.0001s3687 2.0kb downstream 2.0kb downstream 3935 true scaffold_1: 16210780-16214714 Capsella rubella
Carub.0001s3687 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 16210780-16212779 Capsella rubella
Carub.0001s3687 5.0kb upstream 5.0kb upstream 6935 true scaffold_1: 16212780-16219714 Capsella rubella
Carub.0001s3687 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 16214715-16219714 Capsella rubella
Carub.0001s3687 5.0kb downstream 5.0kb downstream 6935 true scaffold_1: 16207780-16214714 Capsella rubella
Carub.0001s3687 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 16207780-16212779 Capsella rubella
Carub.0001s3687 10.0kb upstream 10.0kb upstream 11935 true scaffold_1: 16212780-16224714 Capsella rubella
Carub.0001s3687 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 16214715-16224714 Capsella rubella
Carub.0001s3687 10.0kb downstream 10.0kb downstream 11935 true scaffold_1: 16202780-16214714 Capsella rubella
Carub.0001s3687 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 16202780-16212779 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122338917 5261 Brassicaceae View MSA
123779436 5264 Brassicales-Malvales View MSA
124277760 5266 SBM View MSA
124132928 5268 Malvidae View MSA
124073687 5270 Rosid View MSA
123753150 5271 Pentapetalae View MSA
122797947 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain