Gene : Carub.0001s3700 C. rubella v1.1
Defline:  (1 of 3) PTHR31580//PTHR31580:SF4 - FAMILY NOT NAMED // FILAMENT-LIKE PLANT PROTEIN 4-RELATED Genomic Order:  3700
Name:  ? Carub.0001s3700 Secondary Identifier:  ? PAC:39230287
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3700 0.5kb upstream 0.5kb upstream 4878 true scaffold_1: 16285055-16289932 Capsella rubella
Carub.0001s3700 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 16289433-16289932 Capsella rubella
Carub.0001s3700 0.5kb downstream 0.5kb downstream 4878 true scaffold_1: 16284555-16289432 Capsella rubella
Carub.0001s3700 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 16284555-16285054 Capsella rubella
Carub.0001s3700 1.0kb upstream 1.0kb upstream 5378 true scaffold_1: 16285055-16290432 Capsella rubella
Carub.0001s3700 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 16289433-16290432 Capsella rubella
Carub.0001s3700 1.0kb downstream 1.0kb downstream 5378 true scaffold_1: 16284055-16289432 Capsella rubella
Carub.0001s3700 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 16284055-16285054 Capsella rubella
Carub.0001s3700 2.0kb upstream 2.0kb upstream 6378 true scaffold_1: 16285055-16291432 Capsella rubella
Carub.0001s3700 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 16289433-16291432 Capsella rubella
Carub.0001s3700 2.0kb downstream 2.0kb downstream 6378 true scaffold_1: 16283055-16289432 Capsella rubella
Carub.0001s3700 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 16283055-16285054 Capsella rubella
Carub.0001s3700 5.0kb upstream 5.0kb upstream 9378 true scaffold_1: 16285055-16294432 Capsella rubella
Carub.0001s3700 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 16289433-16294432 Capsella rubella
Carub.0001s3700 5.0kb downstream 5.0kb downstream 9378 true scaffold_1: 16280055-16289432 Capsella rubella
Carub.0001s3700 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 16280055-16285054 Capsella rubella
Carub.0001s3700 10.0kb upstream 10.0kb upstream 14378 true scaffold_1: 16285055-16299432 Capsella rubella
Carub.0001s3700 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 16289433-16299432 Capsella rubella
Carub.0001s3700 10.0kb downstream 10.0kb downstream 14378 true scaffold_1: 16275055-16289432 Capsella rubella
Carub.0001s3700 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 16275055-16285054 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373241 5261 Brassicaceae View MSA
123841089 5264 Brassicales-Malvales View MSA
124343688 5266 SBM View MSA
124252265 5268 Malvidae View MSA
124071208 5270 Rosid View MSA
123744049 5271 Pentapetalae View MSA
122790238 5272 Eudicot View MSA
122044251 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain