Gene : Carub.0001s3714 C. rubella v1.1
Defline:  (1 of 2) 1.2.1.25//1.8.1.4 - 2-oxoisovalerate dehydrogenase (acylating) // Dihydrolipoyl dehydrogenase / Lipoyl dehydrogenase Genomic Order:  3714
Name:  ? Carub.0001s3714 Secondary Identifier:  ? PAC:39228945
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLYCLEAV-PWY Capsella rubella pathologic  
Crubella PWY-5046 Capsella rubella pathologic  
Crubella PWY-5084 Capsella rubella pathologic  
Crubella PWY-5173 Capsella rubella pathologic  
Crubella PWY-5464 Capsella rubella pathologic  
Crubella PYRUVDEHYD-PWY Capsella rubella pathologic  
Crubella VALDEG-PWY Capsella rubella pathologic  

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3714 0.5kb upstream 0.5kb upstream 2714 true scaffold_1: 16364023-16366736 Capsella rubella
Carub.0001s3714 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 16366237-16366736 Capsella rubella
Carub.0001s3714 0.5kb downstream 0.5kb downstream 2714 true scaffold_1: 16363523-16366236 Capsella rubella
Carub.0001s3714 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 16363523-16364022 Capsella rubella
Carub.0001s3714 1.0kb upstream 1.0kb upstream 3214 true scaffold_1: 16364023-16367236 Capsella rubella
Carub.0001s3714 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 16366237-16367236 Capsella rubella
Carub.0001s3714 1.0kb downstream 1.0kb downstream 3214 true scaffold_1: 16363023-16366236 Capsella rubella
Carub.0001s3714 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 16363023-16364022 Capsella rubella
Carub.0001s3714 2.0kb upstream 2.0kb upstream 4214 true scaffold_1: 16364023-16368236 Capsella rubella
Carub.0001s3714 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 16366237-16368236 Capsella rubella
Carub.0001s3714 2.0kb downstream 2.0kb downstream 4214 true scaffold_1: 16362023-16366236 Capsella rubella
Carub.0001s3714 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 16362023-16364022 Capsella rubella
Carub.0001s3714 5.0kb upstream 5.0kb upstream 7214 true scaffold_1: 16364023-16371236 Capsella rubella
Carub.0001s3714 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 16366237-16371236 Capsella rubella
Carub.0001s3714 5.0kb downstream 5.0kb downstream 7214 true scaffold_1: 16359023-16366236 Capsella rubella
Carub.0001s3714 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 16359023-16364022 Capsella rubella
Carub.0001s3714 10.0kb upstream 10.0kb upstream 12214 true scaffold_1: 16364023-16376236 Capsella rubella
Carub.0001s3714 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 16366237-16376236 Capsella rubella
Carub.0001s3714 10.0kb downstream 10.0kb downstream 12214 true scaffold_1: 16354023-16366236 Capsella rubella
Carub.0001s3714 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 16354023-16364022 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378605 5261 Brassicaceae View MSA
123836893 5264 Brassicales-Malvales View MSA
124345171 5266 SBM View MSA
124239269 5268 Malvidae View MSA
124063869 5270 Rosid View MSA
123749055 5271 Pentapetalae View MSA
122790901 5272 Eudicot View MSA
122041676 5273 Angiosperm View MSA
121345591 5274 Embryophyte View MSA
123424332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain