Gene : Carub.0001s3757 C. rubella v1.1
Defline:  (1 of 1) PTHR12701:SF20 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIG5 Genomic Order:  3757
Name:  ? Carub.0001s3757 Secondary Identifier:  ? PAC:39230146
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3757 0.5kb upstream 0.5kb upstream 1991 true scaffold_1: 16584150-16586140 Capsella rubella
Carub.0001s3757 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 16584150-16584649 Capsella rubella
Carub.0001s3757 0.5kb downstream 0.5kb downstream 1991 true scaffold_1: 16584650-16586640 Capsella rubella
Carub.0001s3757 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 16586141-16586640 Capsella rubella
Carub.0001s3757 1.0kb upstream 1.0kb upstream 2491 true scaffold_1: 16583650-16586140 Capsella rubella
Carub.0001s3757 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 16583650-16584649 Capsella rubella
Carub.0001s3757 1.0kb downstream 1.0kb downstream 2491 true scaffold_1: 16584650-16587140 Capsella rubella
Carub.0001s3757 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 16586141-16587140 Capsella rubella
Carub.0001s3757 2.0kb upstream 2.0kb upstream 3491 true scaffold_1: 16582650-16586140 Capsella rubella
Carub.0001s3757 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 16582650-16584649 Capsella rubella
Carub.0001s3757 2.0kb downstream 2.0kb downstream 3491 true scaffold_1: 16584650-16588140 Capsella rubella
Carub.0001s3757 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 16586141-16588140 Capsella rubella
Carub.0001s3757 5.0kb upstream 5.0kb upstream 6491 true scaffold_1: 16579650-16586140 Capsella rubella
Carub.0001s3757 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 16579650-16584649 Capsella rubella
Carub.0001s3757 5.0kb downstream 5.0kb downstream 6491 true scaffold_1: 16584650-16591140 Capsella rubella
Carub.0001s3757 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 16586141-16591140 Capsella rubella
Carub.0001s3757 10.0kb upstream 10.0kb upstream 11491 true scaffold_1: 16574650-16586140 Capsella rubella
Carub.0001s3757 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 16574650-16584649 Capsella rubella
Carub.0001s3757 10.0kb downstream 10.0kb downstream 11491 true scaffold_1: 16584650-16596140 Capsella rubella
Carub.0001s3757 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 16586141-16596140 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380322 5261 Brassicaceae View MSA
123836533 5264 Brassicales-Malvales View MSA
124342792 5266 SBM View MSA
124251721 5268 Malvidae View MSA
124061614 5270 Rosid View MSA
123738808 5271 Pentapetalae View MSA
122789098 5272 Eudicot View MSA
122042109 5273 Angiosperm View MSA
121344883 5274 Embryophyte View MSA
123380122 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain