Gene : Carub.0005s2522 C. rubella v1.1
Genomic Order:  2522 Name:  ? Carub.0005s2522
Secondary Identifier:  ? PAC:39226191
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2522 0.5kb upstream 0.5kb upstream 3067 true scaffold_5: 11899780-11902846 Capsella rubella
Carub.0005s2522 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11899780-11900279 Capsella rubella
Carub.0005s2522 0.5kb downstream 0.5kb downstream 3067 true scaffold_5: 11900280-11903346 Capsella rubella
Carub.0005s2522 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11902847-11903346 Capsella rubella
Carub.0005s2522 1.0kb upstream 1.0kb upstream 3567 true scaffold_5: 11899280-11902846 Capsella rubella
Carub.0005s2522 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11899280-11900279 Capsella rubella
Carub.0005s2522 1.0kb downstream 1.0kb downstream 3567 true scaffold_5: 11900280-11903846 Capsella rubella
Carub.0005s2522 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11902847-11903846 Capsella rubella
Carub.0005s2522 2.0kb upstream 2.0kb upstream 4567 true scaffold_5: 11898280-11902846 Capsella rubella
Carub.0005s2522 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11898280-11900279 Capsella rubella
Carub.0005s2522 2.0kb downstream 2.0kb downstream 4567 true scaffold_5: 11900280-11904846 Capsella rubella
Carub.0005s2522 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11902847-11904846 Capsella rubella
Carub.0005s2522 5.0kb upstream 5.0kb upstream 7567 true scaffold_5: 11895280-11902846 Capsella rubella
Carub.0005s2522 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11895280-11900279 Capsella rubella
Carub.0005s2522 5.0kb downstream 5.0kb downstream 7567 true scaffold_5: 11900280-11907846 Capsella rubella
Carub.0005s2522 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11902847-11907846 Capsella rubella
Carub.0005s2522 10.0kb upstream 10.0kb upstream 12567 true scaffold_5: 11890280-11902846 Capsella rubella
Carub.0005s2522 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11890280-11900279 Capsella rubella
Carub.0005s2522 10.0kb downstream 10.0kb downstream 12567 true scaffold_5: 11900280-11912846 Capsella rubella
Carub.0005s2522 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11902847-11912846 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366492 5261 Brassicaceae View MSA
123835902 5264 Brassicales-Malvales View MSA
124337338 5266 SBM View MSA
124237165 5268 Malvidae View MSA
124064721 5270 Rosid View MSA
123737438 5271 Pentapetalae View MSA
122795644 5272 Eudicot View MSA
122045965 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain