Gene : Carub.0005s2516 C. rubella v1.1
Defline:  (1 of 47) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  2516
Name:  ? Carub.0005s2516 Secondary Identifier:  ? PAC:39224224
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2516 0.5kb upstream 0.5kb upstream 2061 true scaffold_5: 11882003-11884063 Capsella rubella
Carub.0005s2516 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11883564-11884063 Capsella rubella
Carub.0005s2516 0.5kb downstream 0.5kb downstream 2061 true scaffold_5: 11881503-11883563 Capsella rubella
Carub.0005s2516 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11881503-11882002 Capsella rubella
Carub.0005s2516 1.0kb upstream 1.0kb upstream 2561 true scaffold_5: 11882003-11884563 Capsella rubella
Carub.0005s2516 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11883564-11884563 Capsella rubella
Carub.0005s2516 1.0kb downstream 1.0kb downstream 2561 true scaffold_5: 11881003-11883563 Capsella rubella
Carub.0005s2516 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11881003-11882002 Capsella rubella
Carub.0005s2516 2.0kb upstream 2.0kb upstream 3561 true scaffold_5: 11882003-11885563 Capsella rubella
Carub.0005s2516 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11883564-11885563 Capsella rubella
Carub.0005s2516 2.0kb downstream 2.0kb downstream 3561 true scaffold_5: 11880003-11883563 Capsella rubella
Carub.0005s2516 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11880003-11882002 Capsella rubella
Carub.0005s2516 5.0kb upstream 5.0kb upstream 6561 true scaffold_5: 11882003-11888563 Capsella rubella
Carub.0005s2516 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11883564-11888563 Capsella rubella
Carub.0005s2516 5.0kb downstream 5.0kb downstream 6561 true scaffold_5: 11877003-11883563 Capsella rubella
Carub.0005s2516 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11877003-11882002 Capsella rubella
Carub.0005s2516 10.0kb upstream 10.0kb upstream 11561 true scaffold_5: 11882003-11893563 Capsella rubella
Carub.0005s2516 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11883564-11893563 Capsella rubella
Carub.0005s2516 10.0kb downstream 10.0kb downstream 11561 true scaffold_5: 11872003-11883563 Capsella rubella
Carub.0005s2516 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11872003-11882002 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122379968 5261 Brassicaceae View MSA
123802499 5264 Brassicales-Malvales View MSA
124299689 5266 SBM View MSA
124151030 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain