Gene : Carub.0005s2966 C. rubella v1.1
Defline:  (1 of 1) PTHR23024:SF98 - GIBBERELLIN RECEPTOR GID1B Genomic Order:  2966
Name:  ? Carub.0005s2966 Secondary Identifier:  ? PAC:39224701
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6303 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2966 0.5kb upstream 0.5kb upstream 2718 true scaffold_5: 13539831-13542548 Capsella rubella
Carub.0005s2966 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13539831-13540330 Capsella rubella
Carub.0005s2966 0.5kb downstream 0.5kb downstream 2718 true scaffold_5: 13540331-13543048 Capsella rubella
Carub.0005s2966 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13542549-13543048 Capsella rubella
Carub.0005s2966 1.0kb upstream 1.0kb upstream 3218 true scaffold_5: 13539331-13542548 Capsella rubella
Carub.0005s2966 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13539331-13540330 Capsella rubella
Carub.0005s2966 1.0kb downstream 1.0kb downstream 3218 true scaffold_5: 13540331-13543548 Capsella rubella
Carub.0005s2966 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13542549-13543548 Capsella rubella
Carub.0005s2966 2.0kb upstream 2.0kb upstream 4218 true scaffold_5: 13538331-13542548 Capsella rubella
Carub.0005s2966 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13538331-13540330 Capsella rubella
Carub.0005s2966 2.0kb downstream 2.0kb downstream 4218 true scaffold_5: 13540331-13544548 Capsella rubella
Carub.0005s2966 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13542549-13544548 Capsella rubella
Carub.0005s2966 5.0kb upstream 5.0kb upstream 7218 true scaffold_5: 13535331-13542548 Capsella rubella
Carub.0005s2966 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13535331-13540330 Capsella rubella
Carub.0005s2966 5.0kb downstream 5.0kb downstream 7218 true scaffold_5: 13540331-13547548 Capsella rubella
Carub.0005s2966 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13542549-13547548 Capsella rubella
Carub.0005s2966 10.0kb upstream 10.0kb upstream 12218 true scaffold_5: 13530331-13542548 Capsella rubella
Carub.0005s2966 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13530331-13540330 Capsella rubella
Carub.0005s2966 10.0kb downstream 10.0kb downstream 12218 true scaffold_5: 13540331-13552548 Capsella rubella
Carub.0005s2966 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13542549-13552548 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369158 5261 Brassicaceae View MSA
123827560 5264 Brassicales-Malvales View MSA
124336424 5266 SBM View MSA
124241929 5268 Malvidae View MSA
124064220 5270 Rosid View MSA
123745605 5271 Pentapetalae View MSA
122795616 5272 Eudicot View MSA
122044098 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350684 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain