Gene : Carub.0001s2276 C. rubella v1.1
Defline:  (1 of 3) K01835 - phosphoglucomutase (pgm) Genomic Order:  2276
Name:  ? Carub.0001s2276 Secondary Identifier:  ? PAC:39229181
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLUCOSE1PMETAB-PWY Capsella rubella pathologic  
Crubella GLYCOGENSYNTH-PWY Capsella rubella pathologic  
Crubella PWY-3801 Capsella rubella pathologic  
Crubella PWY-622 Capsella rubella pathologic  
Crubella PWY66-422 Capsella rubella pathologic  
Crubella PWY-7238 Capsella rubella pathologic  
Crubella PWY-7343 Capsella rubella pathologic  
Crubella SUCSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2276 0.5kb upstream 0.5kb upstream 5235 true scaffold_1: 8208213-8213447 Capsella rubella
Carub.0001s2276 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8208213-8208712 Capsella rubella
Carub.0001s2276 0.5kb downstream 0.5kb downstream 5235 true scaffold_1: 8208713-8213947 Capsella rubella
Carub.0001s2276 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8213448-8213947 Capsella rubella
Carub.0001s2276 1.0kb upstream 1.0kb upstream 5735 true scaffold_1: 8207713-8213447 Capsella rubella
Carub.0001s2276 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8207713-8208712 Capsella rubella
Carub.0001s2276 1.0kb downstream 1.0kb downstream 5735 true scaffold_1: 8208713-8214447 Capsella rubella
Carub.0001s2276 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8213448-8214447 Capsella rubella
Carub.0001s2276 2.0kb upstream 2.0kb upstream 6735 true scaffold_1: 8206713-8213447 Capsella rubella
Carub.0001s2276 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8206713-8208712 Capsella rubella
Carub.0001s2276 2.0kb downstream 2.0kb downstream 6735 true scaffold_1: 8208713-8215447 Capsella rubella
Carub.0001s2276 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8213448-8215447 Capsella rubella
Carub.0001s2276 5.0kb upstream 5.0kb upstream 9735 true scaffold_1: 8203713-8213447 Capsella rubella
Carub.0001s2276 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8203713-8208712 Capsella rubella
Carub.0001s2276 5.0kb downstream 5.0kb downstream 9735 true scaffold_1: 8208713-8218447 Capsella rubella
Carub.0001s2276 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8213448-8218447 Capsella rubella
Carub.0001s2276 10.0kb upstream 10.0kb upstream 14735 true scaffold_1: 8198713-8213447 Capsella rubella
Carub.0001s2276 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8198713-8208712 Capsella rubella
Carub.0001s2276 10.0kb downstream 10.0kb downstream 14735 true scaffold_1: 8208713-8223447 Capsella rubella
Carub.0001s2276 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8213448-8223447 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364390 5261 Brassicaceae View MSA
123835209 5264 Brassicales-Malvales View MSA
124342115 5266 SBM View MSA
124253593 5268 Malvidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain