Gene : Carub.0001s2272 C. rubella v1.1
Defline:  (1 of 4) PTHR33270//PTHR33270:SF5 - FAMILY NOT NAMED // GB|AAC00605.1 Genomic Order:  2272
Name:  ? Carub.0001s2272 Secondary Identifier:  ? PAC:39231269
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2272 0.5kb upstream 0.5kb upstream 1094 true scaffold_1: 8195543-8196636 Capsella rubella
Carub.0001s2272 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8195543-8196042 Capsella rubella
Carub.0001s2272 0.5kb downstream 0.5kb downstream 1094 true scaffold_1: 8196043-8197136 Capsella rubella
Carub.0001s2272 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8196637-8197136 Capsella rubella
Carub.0001s2272 1.0kb upstream 1.0kb upstream 1594 true scaffold_1: 8195043-8196636 Capsella rubella
Carub.0001s2272 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8195043-8196042 Capsella rubella
Carub.0001s2272 1.0kb downstream 1.0kb downstream 1594 true scaffold_1: 8196043-8197636 Capsella rubella
Carub.0001s2272 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8196637-8197636 Capsella rubella
Carub.0001s2272 2.0kb upstream 2.0kb upstream 2594 true scaffold_1: 8194043-8196636 Capsella rubella
Carub.0001s2272 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8194043-8196042 Capsella rubella
Carub.0001s2272 2.0kb downstream 2.0kb downstream 2594 true scaffold_1: 8196043-8198636 Capsella rubella
Carub.0001s2272 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8196637-8198636 Capsella rubella
Carub.0001s2272 5.0kb upstream 5.0kb upstream 5594 true scaffold_1: 8191043-8196636 Capsella rubella
Carub.0001s2272 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8191043-8196042 Capsella rubella
Carub.0001s2272 5.0kb downstream 5.0kb downstream 5594 true scaffold_1: 8196043-8201636 Capsella rubella
Carub.0001s2272 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8196637-8201636 Capsella rubella
Carub.0001s2272 10.0kb upstream 10.0kb upstream 10594 true scaffold_1: 8186043-8196636 Capsella rubella
Carub.0001s2272 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8186043-8196042 Capsella rubella
Carub.0001s2272 10.0kb downstream 10.0kb downstream 10594 true scaffold_1: 8196043-8206636 Capsella rubella
Carub.0001s2272 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8196637-8206636 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368699 5261 Brassicaceae View MSA
123837425 5264 Brassicales-Malvales View MSA
124338159 5266 SBM View MSA
124239883 5268 Malvidae View MSA
124068577 5270 Rosid View MSA
123740302 5271 Pentapetalae View MSA
122797585 5272 Eudicot View MSA
122049795 5273 Angiosperm View MSA
121311591 5274 Embryophyte View MSA
123348867 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain