Gene : Carub.0005s2962 C. rubella v1.1
Defline:  (1 of 1) PTHR21319//PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  2962
Name:  ? Carub.0005s2962 Secondary Identifier:  ? PAC:39223983
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2962 0.5kb upstream 0.5kb upstream 3024 true scaffold_5: 13514035-13517058 Capsella rubella
Carub.0005s2962 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13514035-13514534 Capsella rubella
Carub.0005s2962 0.5kb downstream 0.5kb downstream 3024 true scaffold_5: 13514535-13517558 Capsella rubella
Carub.0005s2962 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13517059-13517558 Capsella rubella
Carub.0005s2962 1.0kb upstream 1.0kb upstream 3524 true scaffold_5: 13513535-13517058 Capsella rubella
Carub.0005s2962 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13513535-13514534 Capsella rubella
Carub.0005s2962 1.0kb downstream 1.0kb downstream 3524 true scaffold_5: 13514535-13518058 Capsella rubella
Carub.0005s2962 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13517059-13518058 Capsella rubella
Carub.0005s2962 2.0kb upstream 2.0kb upstream 4524 true scaffold_5: 13512535-13517058 Capsella rubella
Carub.0005s2962 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13512535-13514534 Capsella rubella
Carub.0005s2962 2.0kb downstream 2.0kb downstream 4524 true scaffold_5: 13514535-13519058 Capsella rubella
Carub.0005s2962 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13517059-13519058 Capsella rubella
Carub.0005s2962 5.0kb upstream 5.0kb upstream 7524 true scaffold_5: 13509535-13517058 Capsella rubella
Carub.0005s2962 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13509535-13514534 Capsella rubella
Carub.0005s2962 5.0kb downstream 5.0kb downstream 7524 true scaffold_5: 13514535-13522058 Capsella rubella
Carub.0005s2962 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13517059-13522058 Capsella rubella
Carub.0005s2962 10.0kb upstream 10.0kb upstream 12524 true scaffold_5: 13504535-13517058 Capsella rubella
Carub.0005s2962 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13504535-13514534 Capsella rubella
Carub.0005s2962 10.0kb downstream 10.0kb downstream 12524 true scaffold_5: 13514535-13527058 Capsella rubella
Carub.0005s2962 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13517059-13527058 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370745 5261 Brassicaceae View MSA
123831380 5264 Brassicales-Malvales View MSA
124321725 5266 SBM View MSA
124239052 5268 Malvidae View MSA
124050337 5270 Rosid View MSA
123740873 5271 Pentapetalae View MSA
122769993 5272 Eudicot View MSA
122043981 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121310221 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain