Gene : Carub.0001s2344 C. rubella v1.1

Defline:  (1 of 2) PTHR31907//PTHR31907:SF1 - FAMILY NOT NAMED // MLP-LIKE PROTEIN 423-RELATED Genomic Order:  2344
Name:  ? Carub.0001s2344 Secondary Identifier:  ? PAC:39229173

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2344 0.5kb upstream 0.5kb upstream 1564 true scaffold_1: 8419870-8421433 Capsella rubella
Carub.0001s2344 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8420934-8421433 Capsella rubella
Carub.0001s2344 0.5kb downstream 0.5kb downstream 1564 true scaffold_1: 8419370-8420933 Capsella rubella
Carub.0001s2344 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8419370-8419869 Capsella rubella
Carub.0001s2344 1.0kb upstream 1.0kb upstream 2064 true scaffold_1: 8419870-8421933 Capsella rubella
Carub.0001s2344 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8420934-8421933 Capsella rubella
Carub.0001s2344 1.0kb downstream 1.0kb downstream 2064 true scaffold_1: 8418870-8420933 Capsella rubella
Carub.0001s2344 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8418870-8419869 Capsella rubella
Carub.0001s2344 2.0kb upstream 2.0kb upstream 3064 true scaffold_1: 8419870-8422933 Capsella rubella
Carub.0001s2344 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8420934-8422933 Capsella rubella
Carub.0001s2344 2.0kb downstream 2.0kb downstream 3064 true scaffold_1: 8417870-8420933 Capsella rubella
Carub.0001s2344 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8417870-8419869 Capsella rubella
Carub.0001s2344 5.0kb upstream 5.0kb upstream 6064 true scaffold_1: 8419870-8425933 Capsella rubella
Carub.0001s2344 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8420934-8425933 Capsella rubella
Carub.0001s2344 5.0kb downstream 5.0kb downstream 6064 true scaffold_1: 8414870-8420933 Capsella rubella
Carub.0001s2344 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8414870-8419869 Capsella rubella
Carub.0001s2344 10.0kb upstream 10.0kb upstream 11064 true scaffold_1: 8419870-8430933 Capsella rubella
Carub.0001s2344 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8420934-8430933 Capsella rubella
Carub.0001s2344 10.0kb downstream 10.0kb downstream 11064 true scaffold_1: 8409870-8420933 Capsella rubella
Carub.0001s2344 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8409870-8419869 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367785 5261 Brassicaceae View MSA
123827725 5264 Brassicales-Malvales View MSA
124338018 5266 SBM View MSA
124238090 5268 Malvidae View MSA
124064085 5270 Rosid View MSA
123738083 5271 Pentapetalae View MSA
122796960 5272 Eudicot View MSA
122046763 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain