Gene : Carub.0001s2358 C. rubella v1.1
Defline:  (1 of 2) 3.4.24.22 - Stromelysin 2 / Transin 2 Genomic Order:  2358
Name:  ? Carub.0001s2358 Secondary Identifier:  ? PAC:39228661
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2358 0.5kb upstream 0.5kb upstream 1646 true scaffold_1: 8454261-8455906 Capsella rubella
Carub.0001s2358 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8455407-8455906 Capsella rubella
Carub.0001s2358 0.5kb downstream 0.5kb downstream 1646 true scaffold_1: 8453761-8455406 Capsella rubella
Carub.0001s2358 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8453761-8454260 Capsella rubella
Carub.0001s2358 1.0kb upstream 1.0kb upstream 2146 true scaffold_1: 8454261-8456406 Capsella rubella
Carub.0001s2358 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8455407-8456406 Capsella rubella
Carub.0001s2358 1.0kb downstream 1.0kb downstream 2146 true scaffold_1: 8453261-8455406 Capsella rubella
Carub.0001s2358 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8453261-8454260 Capsella rubella
Carub.0001s2358 2.0kb upstream 2.0kb upstream 3146 true scaffold_1: 8454261-8457406 Capsella rubella
Carub.0001s2358 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8455407-8457406 Capsella rubella
Carub.0001s2358 2.0kb downstream 2.0kb downstream 3146 true scaffold_1: 8452261-8455406 Capsella rubella
Carub.0001s2358 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8452261-8454260 Capsella rubella
Carub.0001s2358 5.0kb upstream 5.0kb upstream 6146 true scaffold_1: 8454261-8460406 Capsella rubella
Carub.0001s2358 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8455407-8460406 Capsella rubella
Carub.0001s2358 5.0kb downstream 5.0kb downstream 6146 true scaffold_1: 8449261-8455406 Capsella rubella
Carub.0001s2358 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8449261-8454260 Capsella rubella
Carub.0001s2358 10.0kb upstream 10.0kb upstream 11146 true scaffold_1: 8454261-8465406 Capsella rubella
Carub.0001s2358 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8455407-8465406 Capsella rubella
Carub.0001s2358 10.0kb downstream 10.0kb downstream 11146 true scaffold_1: 8444261-8455406 Capsella rubella
Carub.0001s2358 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8444261-8454260 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041440 5273 Angiosperm View MSA
122370339 5261 Brassicaceae View MSA
123835470 5264 Brassicales-Malvales View MSA
124350845 5266 SBM View MSA
124249735 5268 Malvidae View MSA
124061806 5270 Rosid View MSA
123745217 5271 Pentapetalae View MSA
122786222 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain