Gene : Carub.0001s2380 C. rubella v1.1
Defline:  (1 of 2) PTHR16263//PTHR16263:SF4 - FAMILY NOT NAMED // TETRATRICOPEPTIDE REPEAT PROTEIN 38 Genomic Order:  2380
Name:  ? Carub.0001s2380 Secondary Identifier:  ? PAC:39230199
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2380 0.5kb upstream 0.5kb upstream 3745 true scaffold_1: 8542961-8546705 Capsella rubella
Carub.0001s2380 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8546206-8546705 Capsella rubella
Carub.0001s2380 0.5kb downstream 0.5kb downstream 3745 true scaffold_1: 8542461-8546205 Capsella rubella
Carub.0001s2380 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8542461-8542960 Capsella rubella
Carub.0001s2380 1.0kb upstream 1.0kb upstream 4245 true scaffold_1: 8542961-8547205 Capsella rubella
Carub.0001s2380 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8546206-8547205 Capsella rubella
Carub.0001s2380 1.0kb downstream 1.0kb downstream 4245 true scaffold_1: 8541961-8546205 Capsella rubella
Carub.0001s2380 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8541961-8542960 Capsella rubella
Carub.0001s2380 2.0kb upstream 2.0kb upstream 5245 true scaffold_1: 8542961-8548205 Capsella rubella
Carub.0001s2380 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8546206-8548205 Capsella rubella
Carub.0001s2380 2.0kb downstream 2.0kb downstream 5245 true scaffold_1: 8540961-8546205 Capsella rubella
Carub.0001s2380 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8540961-8542960 Capsella rubella
Carub.0001s2380 5.0kb upstream 5.0kb upstream 8245 true scaffold_1: 8542961-8551205 Capsella rubella
Carub.0001s2380 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8546206-8551205 Capsella rubella
Carub.0001s2380 5.0kb downstream 5.0kb downstream 8245 true scaffold_1: 8537961-8546205 Capsella rubella
Carub.0001s2380 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8537961-8542960 Capsella rubella
Carub.0001s2380 10.0kb upstream 10.0kb upstream 13245 true scaffold_1: 8542961-8556205 Capsella rubella
Carub.0001s2380 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8546206-8556205 Capsella rubella
Carub.0001s2380 10.0kb downstream 10.0kb downstream 13245 true scaffold_1: 8532961-8546205 Capsella rubella
Carub.0001s2380 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8532961-8542960 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364552 5261 Brassicaceae View MSA
123839920 5264 Brassicales-Malvales View MSA
124338528 5266 SBM View MSA
124240073 5268 Malvidae View MSA
124066695 5270 Rosid View MSA
123740616 5271 Pentapetalae View MSA
122790919 5272 Eudicot View MSA
122043704 5273 Angiosperm View MSA
121346225 5274 Embryophyte View MSA
123380350 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain