Gene : Carub.0001s2670 C. rubella v1.1
Defline:  (1 of 1) PTHR15696:SF3 - PROTEIN SMG7L Genomic Order:  2670
Name:  ? Carub.0001s2670 Secondary Identifier:  ? PAC:39231393
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2670 0.5kb upstream 0.5kb upstream 3695 true scaffold_1: 9683394-9687088 Capsella rubella
Carub.0001s2670 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9686589-9687088 Capsella rubella
Carub.0001s2670 0.5kb downstream 0.5kb downstream 3695 true scaffold_1: 9682894-9686588 Capsella rubella
Carub.0001s2670 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9682894-9683393 Capsella rubella
Carub.0001s2670 1.0kb upstream 1.0kb upstream 4195 true scaffold_1: 9683394-9687588 Capsella rubella
Carub.0001s2670 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9686589-9687588 Capsella rubella
Carub.0001s2670 1.0kb downstream 1.0kb downstream 4195 true scaffold_1: 9682394-9686588 Capsella rubella
Carub.0001s2670 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9682394-9683393 Capsella rubella
Carub.0001s2670 2.0kb upstream 2.0kb upstream 5195 true scaffold_1: 9683394-9688588 Capsella rubella
Carub.0001s2670 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9686589-9688588 Capsella rubella
Carub.0001s2670 2.0kb downstream 2.0kb downstream 5195 true scaffold_1: 9681394-9686588 Capsella rubella
Carub.0001s2670 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9681394-9683393 Capsella rubella
Carub.0001s2670 5.0kb upstream 5.0kb upstream 8195 true scaffold_1: 9683394-9691588 Capsella rubella
Carub.0001s2670 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9686589-9691588 Capsella rubella
Carub.0001s2670 5.0kb downstream 5.0kb downstream 8195 true scaffold_1: 9678394-9686588 Capsella rubella
Carub.0001s2670 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9678394-9683393 Capsella rubella
Carub.0001s2670 10.0kb upstream 10.0kb upstream 13195 true scaffold_1: 9683394-9696588 Capsella rubella
Carub.0001s2670 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9686589-9696588 Capsella rubella
Carub.0001s2670 10.0kb downstream 10.0kb downstream 13195 true scaffold_1: 9673394-9686588 Capsella rubella
Carub.0001s2670 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9673394-9683393 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375000 5261 Brassicaceae View MSA
123833484 5264 Brassicales-Malvales View MSA
124350092 5266 SBM View MSA
124242900 5268 Malvidae View MSA
124050275 5270 Rosid View MSA
123740560 5271 Pentapetalae View MSA
122792675 5272 Eudicot View MSA
122043425 5273 Angiosperm View MSA
121310120 5274 Embryophyte View MSA
123426231 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain