Gene : Carub.0001s2209 C. rubella v1.1
Defline:  (1 of 7) PTHR11654//PTHR11654:SF94 - OLIGOPEPTIDE TRANSPORTER-RELATED // PROTEIN NRT1/ PTR FAMILY 5.10-RELATED Genomic Order:  2209
Name:  ? Carub.0001s2209 Secondary Identifier:  ? PAC:39228771
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2209 0.5kb upstream 0.5kb upstream 2598 true scaffold_1: 7954673-7957270 Capsella rubella
Carub.0001s2209 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7956771-7957270 Capsella rubella
Carub.0001s2209 0.5kb downstream 0.5kb downstream 2598 true scaffold_1: 7954173-7956770 Capsella rubella
Carub.0001s2209 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7954173-7954672 Capsella rubella
Carub.0001s2209 1.0kb upstream 1.0kb upstream 3098 true scaffold_1: 7954673-7957770 Capsella rubella
Carub.0001s2209 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7956771-7957770 Capsella rubella
Carub.0001s2209 1.0kb downstream 1.0kb downstream 3098 true scaffold_1: 7953673-7956770 Capsella rubella
Carub.0001s2209 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7953673-7954672 Capsella rubella
Carub.0001s2209 2.0kb upstream 2.0kb upstream 4098 true scaffold_1: 7954673-7958770 Capsella rubella
Carub.0001s2209 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7956771-7958770 Capsella rubella
Carub.0001s2209 2.0kb downstream 2.0kb downstream 4098 true scaffold_1: 7952673-7956770 Capsella rubella
Carub.0001s2209 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7952673-7954672 Capsella rubella
Carub.0001s2209 5.0kb upstream 5.0kb upstream 7098 true scaffold_1: 7954673-7961770 Capsella rubella
Carub.0001s2209 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7956771-7961770 Capsella rubella
Carub.0001s2209 5.0kb downstream 5.0kb downstream 7098 true scaffold_1: 7949673-7956770 Capsella rubella
Carub.0001s2209 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7949673-7954672 Capsella rubella
Carub.0001s2209 10.0kb upstream 10.0kb upstream 12098 true scaffold_1: 7954673-7966770 Capsella rubella
Carub.0001s2209 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7956771-7966770 Capsella rubella
Carub.0001s2209 10.0kb downstream 10.0kb downstream 12098 true scaffold_1: 7944673-7956770 Capsella rubella
Carub.0001s2209 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7944673-7954672 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366046 5261 Brassicaceae View MSA
123799095 5264 Brassicales-Malvales View MSA
124296650 5266 SBM View MSA
124148741 5268 Malvidae View MSA
123874679 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain