Gene : Carub.0001s2207 C. rubella v1.1
Defline:  (1 of 7) PTHR11654//PTHR11654:SF94 - OLIGOPEPTIDE TRANSPORTER-RELATED // PROTEIN NRT1/ PTR FAMILY 5.10-RELATED Genomic Order:  2207
Name:  ? Carub.0001s2207 Secondary Identifier:  ? PAC:39230389
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2207 0.5kb upstream 0.5kb upstream 2968 true scaffold_1: 7947994-7950961 Capsella rubella
Carub.0001s2207 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7947994-7948493 Capsella rubella
Carub.0001s2207 0.5kb downstream 0.5kb downstream 2968 true scaffold_1: 7948494-7951461 Capsella rubella
Carub.0001s2207 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7950962-7951461 Capsella rubella
Carub.0001s2207 1.0kb upstream 1.0kb upstream 3468 true scaffold_1: 7947494-7950961 Capsella rubella
Carub.0001s2207 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7947494-7948493 Capsella rubella
Carub.0001s2207 1.0kb downstream 1.0kb downstream 3468 true scaffold_1: 7948494-7951961 Capsella rubella
Carub.0001s2207 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7950962-7951961 Capsella rubella
Carub.0001s2207 2.0kb upstream 2.0kb upstream 4468 true scaffold_1: 7946494-7950961 Capsella rubella
Carub.0001s2207 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7946494-7948493 Capsella rubella
Carub.0001s2207 2.0kb downstream 2.0kb downstream 4468 true scaffold_1: 7948494-7952961 Capsella rubella
Carub.0001s2207 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7950962-7952961 Capsella rubella
Carub.0001s2207 5.0kb upstream 5.0kb upstream 7468 true scaffold_1: 7943494-7950961 Capsella rubella
Carub.0001s2207 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7943494-7948493 Capsella rubella
Carub.0001s2207 5.0kb downstream 5.0kb downstream 7468 true scaffold_1: 7948494-7955961 Capsella rubella
Carub.0001s2207 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7950962-7955961 Capsella rubella
Carub.0001s2207 10.0kb upstream 10.0kb upstream 12468 true scaffold_1: 7938494-7950961 Capsella rubella
Carub.0001s2207 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7938494-7948493 Capsella rubella
Carub.0001s2207 10.0kb downstream 10.0kb downstream 12468 true scaffold_1: 7948494-7960961 Capsella rubella
Carub.0001s2207 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7950962-7960961 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363409 5261 Brassicaceae View MSA
123833277 5264 Brassicales-Malvales View MSA
124339663 5266 SBM View MSA
124250409 5268 Malvidae View MSA
124072742 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain