Gene : Carub.0001s2516 C. rubella v1.1
Defline:  (1 of 3) K01886 - glutaminyl-tRNA synthetase (QARS, glnS) Genomic Order:  2516
Name:  ? Carub.0001s2516 Secondary Identifier:  ? PAC:39229849
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella TRNA-CHARGING-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2516 0.5kb upstream 0.5kb upstream 8579 true scaffold_1: 9076027-9084605 Capsella rubella
Carub.0001s2516 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9076027-9076526 Capsella rubella
Carub.0001s2516 0.5kb downstream 0.5kb downstream 8579 true scaffold_1: 9076527-9085105 Capsella rubella
Carub.0001s2516 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9084606-9085105 Capsella rubella
Carub.0001s2516 1.0kb upstream 1.0kb upstream 9079 true scaffold_1: 9075527-9084605 Capsella rubella
Carub.0001s2516 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9075527-9076526 Capsella rubella
Carub.0001s2516 1.0kb downstream 1.0kb downstream 9079 true scaffold_1: 9076527-9085605 Capsella rubella
Carub.0001s2516 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9084606-9085605 Capsella rubella
Carub.0001s2516 2.0kb upstream 2.0kb upstream 10079 true scaffold_1: 9074527-9084605 Capsella rubella
Carub.0001s2516 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9074527-9076526 Capsella rubella
Carub.0001s2516 2.0kb downstream 2.0kb downstream 10079 true scaffold_1: 9076527-9086605 Capsella rubella
Carub.0001s2516 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9084606-9086605 Capsella rubella
Carub.0001s2516 5.0kb upstream 5.0kb upstream 13079 true scaffold_1: 9071527-9084605 Capsella rubella
Carub.0001s2516 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9071527-9076526 Capsella rubella
Carub.0001s2516 5.0kb downstream 5.0kb downstream 13079 true scaffold_1: 9076527-9089605 Capsella rubella
Carub.0001s2516 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9084606-9089605 Capsella rubella
Carub.0001s2516 10.0kb upstream 10.0kb upstream 18079 true scaffold_1: 9066527-9084605 Capsella rubella
Carub.0001s2516 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9066527-9076526 Capsella rubella
Carub.0001s2516 10.0kb downstream 10.0kb downstream 18079 true scaffold_1: 9076527-9094605 Capsella rubella
Carub.0001s2516 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9084606-9094605 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369642 5261 Brassicaceae View MSA
123834323 5264 Brassicales-Malvales View MSA
124337419 5266 SBM View MSA
124240630 5268 Malvidae View MSA
124062151 5270 Rosid View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain