Gene : Carub.0001s2048 C. rubella v1.1
Defline:  (1 of 3) PTHR31065//PTHR31065:SF12 - FAMILY NOT NAMED // PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  2048
Name:  ? Carub.0001s2048 Secondary Identifier:  ? PAC:39229045
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2048 0.5kb upstream 0.5kb upstream 2104 true scaffold_1: 7343525-7345628 Capsella rubella
Carub.0001s2048 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7343525-7344024 Capsella rubella
Carub.0001s2048 0.5kb downstream 0.5kb downstream 2104 true scaffold_1: 7344025-7346128 Capsella rubella
Carub.0001s2048 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7345629-7346128 Capsella rubella
Carub.0001s2048 1.0kb upstream 1.0kb upstream 2604 true scaffold_1: 7343025-7345628 Capsella rubella
Carub.0001s2048 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7343025-7344024 Capsella rubella
Carub.0001s2048 1.0kb downstream 1.0kb downstream 2604 true scaffold_1: 7344025-7346628 Capsella rubella
Carub.0001s2048 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7345629-7346628 Capsella rubella
Carub.0001s2048 2.0kb upstream 2.0kb upstream 3604 true scaffold_1: 7342025-7345628 Capsella rubella
Carub.0001s2048 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7342025-7344024 Capsella rubella
Carub.0001s2048 2.0kb downstream 2.0kb downstream 3604 true scaffold_1: 7344025-7347628 Capsella rubella
Carub.0001s2048 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7345629-7347628 Capsella rubella
Carub.0001s2048 5.0kb upstream 5.0kb upstream 6604 true scaffold_1: 7339025-7345628 Capsella rubella
Carub.0001s2048 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7339025-7344024 Capsella rubella
Carub.0001s2048 5.0kb downstream 5.0kb downstream 6604 true scaffold_1: 7344025-7350628 Capsella rubella
Carub.0001s2048 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7345629-7350628 Capsella rubella
Carub.0001s2048 10.0kb upstream 10.0kb upstream 11604 true scaffold_1: 7334025-7345628 Capsella rubella
Carub.0001s2048 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7334025-7344024 Capsella rubella
Carub.0001s2048 10.0kb downstream 10.0kb downstream 11604 true scaffold_1: 7344025-7355628 Capsella rubella
Carub.0001s2048 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7345629-7355628 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377647 5261 Brassicaceae View MSA
123829852 5264 Brassicales-Malvales View MSA
124345389 5266 SBM View MSA
124250632 5268 Malvidae View MSA
124067246 5270 Rosid View MSA
123753118 5271 Pentapetalae View MSA
122788772 5272 Eudicot View MSA
122050012 5273 Angiosperm View MSA
121349108 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain