Gene : Carub.0001s2106 C. rubella v1.1
Defline:  (1 of 1) PTHR20275:SF6 - NADH KINASE POS5, MITOCHONDRIAL Genomic Order:  2106
Name:  ? Carub.0001s2106 Secondary Identifier:  ? PAC:39229467
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5083 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2106 0.5kb upstream 0.5kb upstream 4738 true scaffold_1: 7571842-7576579 Capsella rubella
Carub.0001s2106 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7571842-7572341 Capsella rubella
Carub.0001s2106 0.5kb downstream 0.5kb downstream 4738 true scaffold_1: 7572342-7577079 Capsella rubella
Carub.0001s2106 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7576580-7577079 Capsella rubella
Carub.0001s2106 1.0kb upstream 1.0kb upstream 5238 true scaffold_1: 7571342-7576579 Capsella rubella
Carub.0001s2106 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7571342-7572341 Capsella rubella
Carub.0001s2106 1.0kb downstream 1.0kb downstream 5238 true scaffold_1: 7572342-7577579 Capsella rubella
Carub.0001s2106 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7576580-7577579 Capsella rubella
Carub.0001s2106 2.0kb upstream 2.0kb upstream 6238 true scaffold_1: 7570342-7576579 Capsella rubella
Carub.0001s2106 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7570342-7572341 Capsella rubella
Carub.0001s2106 2.0kb downstream 2.0kb downstream 6238 true scaffold_1: 7572342-7578579 Capsella rubella
Carub.0001s2106 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7576580-7578579 Capsella rubella
Carub.0001s2106 5.0kb upstream 5.0kb upstream 9238 true scaffold_1: 7567342-7576579 Capsella rubella
Carub.0001s2106 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7567342-7572341 Capsella rubella
Carub.0001s2106 5.0kb downstream 5.0kb downstream 9238 true scaffold_1: 7572342-7581579 Capsella rubella
Carub.0001s2106 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7576580-7581579 Capsella rubella
Carub.0001s2106 10.0kb upstream 10.0kb upstream 14238 true scaffold_1: 7562342-7576579 Capsella rubella
Carub.0001s2106 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7562342-7572341 Capsella rubella
Carub.0001s2106 10.0kb downstream 10.0kb downstream 14238 true scaffold_1: 7572342-7586579 Capsella rubella
Carub.0001s2106 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7576580-7586579 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366031 5261 Brassicaceae View MSA
123835943 5264 Brassicales-Malvales View MSA
124340798 5266 SBM View MSA
124251776 5268 Malvidae View MSA
124068883 5270 Rosid View MSA
123747972 5271 Pentapetalae View MSA
122793469 5272 Eudicot View MSA
122042984 5273 Angiosperm View MSA
121349739 5274 Embryophyte View MSA
123425454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain