Gene : Carub.0001s2151 C. rubella v1.1
Defline:  (1 of 5) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED Genomic Order:  2151
Name:  ? Carub.0001s2151 Secondary Identifier:  ? PAC:39226950
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6351 Capsella rubella pathologic  
Crubella PWY-6352 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2151 0.5kb upstream 0.5kb upstream 4523 true scaffold_1: 7725112-7729634 Capsella rubella
Carub.0001s2151 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7725112-7725611 Capsella rubella
Carub.0001s2151 0.5kb downstream 0.5kb downstream 4523 true scaffold_1: 7725612-7730134 Capsella rubella
Carub.0001s2151 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7729635-7730134 Capsella rubella
Carub.0001s2151 1.0kb upstream 1.0kb upstream 5023 true scaffold_1: 7724612-7729634 Capsella rubella
Carub.0001s2151 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7724612-7725611 Capsella rubella
Carub.0001s2151 1.0kb downstream 1.0kb downstream 5023 true scaffold_1: 7725612-7730634 Capsella rubella
Carub.0001s2151 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7729635-7730634 Capsella rubella
Carub.0001s2151 2.0kb upstream 2.0kb upstream 6023 true scaffold_1: 7723612-7729634 Capsella rubella
Carub.0001s2151 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7723612-7725611 Capsella rubella
Carub.0001s2151 2.0kb downstream 2.0kb downstream 6023 true scaffold_1: 7725612-7731634 Capsella rubella
Carub.0001s2151 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7729635-7731634 Capsella rubella
Carub.0001s2151 5.0kb upstream 5.0kb upstream 9023 true scaffold_1: 7720612-7729634 Capsella rubella
Carub.0001s2151 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7720612-7725611 Capsella rubella
Carub.0001s2151 5.0kb downstream 5.0kb downstream 9023 true scaffold_1: 7725612-7734634 Capsella rubella
Carub.0001s2151 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7729635-7734634 Capsella rubella
Carub.0001s2151 10.0kb upstream 10.0kb upstream 14023 true scaffold_1: 7715612-7729634 Capsella rubella
Carub.0001s2151 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7715612-7725611 Capsella rubella
Carub.0001s2151 10.0kb downstream 10.0kb downstream 14023 true scaffold_1: 7725612-7739634 Capsella rubella
Carub.0001s2151 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7729635-7739634 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362855 5261 Brassicaceae View MSA
123836752 5264 Brassicales-Malvales View MSA
124343464 5266 SBM View MSA
124238939 5268 Malvidae View MSA
124061441 5270 Rosid View MSA
123746948 5271 Pentapetalae View MSA
122794503 5272 Eudicot View MSA
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain