Gene : Carub.0001s2164 C. rubella v1.1
Defline:  (1 of 2) PTHR22952//PTHR22952:SF203 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA3-RELATED Genomic Order:  2164
Name:  ? Carub.0001s2164 Secondary Identifier:  ? PAC:39229633
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2164 0.5kb upstream 0.5kb upstream 3254 true scaffold_1: 7780529-7783782 Capsella rubella
Carub.0001s2164 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7780529-7781028 Capsella rubella
Carub.0001s2164 0.5kb downstream 0.5kb downstream 3254 true scaffold_1: 7781029-7784282 Capsella rubella
Carub.0001s2164 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7783783-7784282 Capsella rubella
Carub.0001s2164 1.0kb upstream 1.0kb upstream 3754 true scaffold_1: 7780029-7783782 Capsella rubella
Carub.0001s2164 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7780029-7781028 Capsella rubella
Carub.0001s2164 1.0kb downstream 1.0kb downstream 3754 true scaffold_1: 7781029-7784782 Capsella rubella
Carub.0001s2164 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7783783-7784782 Capsella rubella
Carub.0001s2164 2.0kb upstream 2.0kb upstream 4754 true scaffold_1: 7779029-7783782 Capsella rubella
Carub.0001s2164 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7779029-7781028 Capsella rubella
Carub.0001s2164 2.0kb downstream 2.0kb downstream 4754 true scaffold_1: 7781029-7785782 Capsella rubella
Carub.0001s2164 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7783783-7785782 Capsella rubella
Carub.0001s2164 5.0kb upstream 5.0kb upstream 7754 true scaffold_1: 7776029-7783782 Capsella rubella
Carub.0001s2164 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7776029-7781028 Capsella rubella
Carub.0001s2164 5.0kb downstream 5.0kb downstream 7754 true scaffold_1: 7781029-7788782 Capsella rubella
Carub.0001s2164 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7783783-7788782 Capsella rubella
Carub.0001s2164 10.0kb upstream 10.0kb upstream 12754 true scaffold_1: 7771029-7783782 Capsella rubella
Carub.0001s2164 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7771029-7781028 Capsella rubella
Carub.0001s2164 10.0kb downstream 10.0kb downstream 12754 true scaffold_1: 7781029-7793782 Capsella rubella
Carub.0001s2164 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7783783-7793782 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370221 5261 Brassicaceae View MSA
123838998 5264 Brassicales-Malvales View MSA
124351040 5266 SBM View MSA
124237534 5268 Malvidae View MSA
124071998 5270 Rosid View MSA
123743683 5271 Pentapetalae View MSA
122792849 5272 Eudicot View MSA
122045464 5273 Angiosperm View MSA
121310452 5274 Embryophyte View MSA
123347930 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain