Gene : Carub.0001s1799 C. rubella v1.1
Defline:  (1 of 1) PTHR11614//PTHR11614:SF97 - PHOSPHOLIPASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1799
Name:  ? Carub.0001s1799 Secondary Identifier:  ? PAC:39230092
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPAS-PWY Capsella rubella pathologic  
Crubella PWY-7420 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1799 0.5kb upstream 0.5kb upstream 2952 true scaffold_1: 6332008-6334959 Capsella rubella
Carub.0001s1799 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6334460-6334959 Capsella rubella
Carub.0001s1799 0.5kb downstream 0.5kb downstream 2952 true scaffold_1: 6331508-6334459 Capsella rubella
Carub.0001s1799 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6331508-6332007 Capsella rubella
Carub.0001s1799 1.0kb upstream 1.0kb upstream 3452 true scaffold_1: 6332008-6335459 Capsella rubella
Carub.0001s1799 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6334460-6335459 Capsella rubella
Carub.0001s1799 1.0kb downstream 1.0kb downstream 3452 true scaffold_1: 6331008-6334459 Capsella rubella
Carub.0001s1799 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6331008-6332007 Capsella rubella
Carub.0001s1799 2.0kb upstream 2.0kb upstream 4452 true scaffold_1: 6332008-6336459 Capsella rubella
Carub.0001s1799 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6334460-6336459 Capsella rubella
Carub.0001s1799 2.0kb downstream 2.0kb downstream 4452 true scaffold_1: 6330008-6334459 Capsella rubella
Carub.0001s1799 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6330008-6332007 Capsella rubella
Carub.0001s1799 5.0kb upstream 5.0kb upstream 7452 true scaffold_1: 6332008-6339459 Capsella rubella
Carub.0001s1799 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6334460-6339459 Capsella rubella
Carub.0001s1799 5.0kb downstream 5.0kb downstream 7452 true scaffold_1: 6327008-6334459 Capsella rubella
Carub.0001s1799 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6327008-6332007 Capsella rubella
Carub.0001s1799 10.0kb upstream 10.0kb upstream 12452 true scaffold_1: 6332008-6344459 Capsella rubella
Carub.0001s1799 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6334460-6344459 Capsella rubella
Carub.0001s1799 10.0kb downstream 10.0kb downstream 12452 true scaffold_1: 6322008-6334459 Capsella rubella
Carub.0001s1799 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6322008-6332007 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371734 5261 Brassicaceae View MSA
123800221 5264 Brassicales-Malvales View MSA
124297663 5266 SBM View MSA
124149494 5268 Malvidae View MSA
123875295 5270 Rosid View MSA
123459143 5271 Pentapetalae View MSA
122494538 5272 Eudicot View MSA
122051494 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain