Gene : Carub.0001s1816 C. rubella v1.1
Defline:  (1 of 2) PTHR10891//PTHR10891:SF638 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALCIUM-BINDING PROTEIN CML15-RELATED Genomic Order:  1816
Name:  ? Carub.0001s1816 Secondary Identifier:  ? PAC:39228395
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1816 0.5kb upstream 0.5kb upstream 974 true scaffold_1: 6404803-6405776 Capsella rubella
Carub.0001s1816 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6404803-6405302 Capsella rubella
Carub.0001s1816 0.5kb downstream 0.5kb downstream 974 true scaffold_1: 6405303-6406276 Capsella rubella
Carub.0001s1816 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6405777-6406276 Capsella rubella
Carub.0001s1816 1.0kb upstream 1.0kb upstream 1474 true scaffold_1: 6404303-6405776 Capsella rubella
Carub.0001s1816 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6404303-6405302 Capsella rubella
Carub.0001s1816 1.0kb downstream 1.0kb downstream 1474 true scaffold_1: 6405303-6406776 Capsella rubella
Carub.0001s1816 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6405777-6406776 Capsella rubella
Carub.0001s1816 2.0kb upstream 2.0kb upstream 2474 true scaffold_1: 6403303-6405776 Capsella rubella
Carub.0001s1816 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6403303-6405302 Capsella rubella
Carub.0001s1816 2.0kb downstream 2.0kb downstream 2474 true scaffold_1: 6405303-6407776 Capsella rubella
Carub.0001s1816 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6405777-6407776 Capsella rubella
Carub.0001s1816 5.0kb upstream 5.0kb upstream 5474 true scaffold_1: 6400303-6405776 Capsella rubella
Carub.0001s1816 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6400303-6405302 Capsella rubella
Carub.0001s1816 5.0kb downstream 5.0kb downstream 5474 true scaffold_1: 6405303-6410776 Capsella rubella
Carub.0001s1816 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6405777-6410776 Capsella rubella
Carub.0001s1816 10.0kb upstream 10.0kb upstream 10474 true scaffold_1: 6395303-6405776 Capsella rubella
Carub.0001s1816 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6395303-6405302 Capsella rubella
Carub.0001s1816 10.0kb downstream 10.0kb downstream 10474 true scaffold_1: 6405303-6415776 Capsella rubella
Carub.0001s1816 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6405777-6415776 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374243 5261 Brassicaceae View MSA
123841028 5264 Brassicales-Malvales View MSA
124345649 5266 SBM View MSA
124248216 5268 Malvidae View MSA
124065956 5270 Rosid View MSA
123753039 5271 Pentapetalae View MSA
122786737 5272 Eudicot View MSA
122047727 5273 Angiosperm View MSA
121350745 5274 Embryophyte View MSA
123381869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain