Gene : Carub.0001s2010 C. rubella v1.1
Defline:  (1 of 3) 1.11.1.21 - Catalase peroxidase Genomic Order:  2010
Name:  ? Carub.0001s2010 Secondary Identifier:  ? PAC:39230728
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella DETOX1-PWY Capsella rubella pathologic  
Crubella DETOX1-PWY-1 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2010 0.5kb upstream 0.5kb upstream 3570 true scaffold_1: 7166496-7170065 Capsella rubella
Carub.0001s2010 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7166496-7166995 Capsella rubella
Carub.0001s2010 0.5kb downstream 0.5kb downstream 3570 true scaffold_1: 7166996-7170565 Capsella rubella
Carub.0001s2010 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7170066-7170565 Capsella rubella
Carub.0001s2010 1.0kb upstream 1.0kb upstream 4070 true scaffold_1: 7165996-7170065 Capsella rubella
Carub.0001s2010 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7165996-7166995 Capsella rubella
Carub.0001s2010 1.0kb downstream 1.0kb downstream 4070 true scaffold_1: 7166996-7171065 Capsella rubella
Carub.0001s2010 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7170066-7171065 Capsella rubella
Carub.0001s2010 2.0kb upstream 2.0kb upstream 5070 true scaffold_1: 7164996-7170065 Capsella rubella
Carub.0001s2010 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7164996-7166995 Capsella rubella
Carub.0001s2010 2.0kb downstream 2.0kb downstream 5070 true scaffold_1: 7166996-7172065 Capsella rubella
Carub.0001s2010 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7170066-7172065 Capsella rubella
Carub.0001s2010 5.0kb upstream 5.0kb upstream 8070 true scaffold_1: 7161996-7170065 Capsella rubella
Carub.0001s2010 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7161996-7166995 Capsella rubella
Carub.0001s2010 5.0kb downstream 5.0kb downstream 8070 true scaffold_1: 7166996-7175065 Capsella rubella
Carub.0001s2010 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7170066-7175065 Capsella rubella
Carub.0001s2010 10.0kb upstream 10.0kb upstream 13070 true scaffold_1: 7156996-7170065 Capsella rubella
Carub.0001s2010 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7156996-7166995 Capsella rubella
Carub.0001s2010 10.0kb downstream 10.0kb downstream 13070 true scaffold_1: 7166996-7180065 Capsella rubella
Carub.0001s2010 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7170066-7180065 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
122373420 5261 Brassicaceae View MSA
123837299 5264 Brassicales-Malvales View MSA
124338278 5266 SBM View MSA
124254242 5268 Malvidae View MSA
124061092 5270 Rosid View MSA
123744547 5271 Pentapetalae View MSA
122789351 5272 Eudicot View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain