Gene : Carub.0001s2035 C. rubella v1.1
Defline:  (1 of 11) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Genomic Order:  2035
Name:  ? Carub.0001s2035 Secondary Identifier:  ? PAC:39227939
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2035 0.5kb upstream 0.5kb upstream 4018 true scaffold_1: 7264784-7268801 Capsella rubella
Carub.0001s2035 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7268302-7268801 Capsella rubella
Carub.0001s2035 0.5kb downstream 0.5kb downstream 4018 true scaffold_1: 7264284-7268301 Capsella rubella
Carub.0001s2035 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7264284-7264783 Capsella rubella
Carub.0001s2035 1.0kb upstream 1.0kb upstream 4518 true scaffold_1: 7264784-7269301 Capsella rubella
Carub.0001s2035 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7268302-7269301 Capsella rubella
Carub.0001s2035 1.0kb downstream 1.0kb downstream 4518 true scaffold_1: 7263784-7268301 Capsella rubella
Carub.0001s2035 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7263784-7264783 Capsella rubella
Carub.0001s2035 2.0kb upstream 2.0kb upstream 5518 true scaffold_1: 7264784-7270301 Capsella rubella
Carub.0001s2035 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7268302-7270301 Capsella rubella
Carub.0001s2035 2.0kb downstream 2.0kb downstream 5518 true scaffold_1: 7262784-7268301 Capsella rubella
Carub.0001s2035 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7262784-7264783 Capsella rubella
Carub.0001s2035 5.0kb upstream 5.0kb upstream 8518 true scaffold_1: 7264784-7273301 Capsella rubella
Carub.0001s2035 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7268302-7273301 Capsella rubella
Carub.0001s2035 5.0kb downstream 5.0kb downstream 8518 true scaffold_1: 7259784-7268301 Capsella rubella
Carub.0001s2035 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7259784-7264783 Capsella rubella
Carub.0001s2035 10.0kb upstream 10.0kb upstream 13518 true scaffold_1: 7264784-7278301 Capsella rubella
Carub.0001s2035 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7268302-7278301 Capsella rubella
Carub.0001s2035 10.0kb downstream 10.0kb downstream 13518 true scaffold_1: 7254784-7268301 Capsella rubella
Carub.0001s2035 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7254784-7264783 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377525 5261 Brassicaceae View MSA
123801555 5264 Brassicales-Malvales View MSA
124298844 5266 SBM View MSA
124150394 5268 Malvidae View MSA
123876014 5270 Rosid View MSA
123753453 5271 Pentapetalae View MSA
122797686 5272 Eudicot View MSA
122043296 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121350049 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain