Gene : Carub.0001s1782 C. rubella v1.1
Defline:  (1 of 2) 1.3.99.5 - 3-oxo-5-alpha-steroid 4-dehydrogenase (acceptor) / Steroid 5-alpha-reductase Genomic Order:  1782
Name:  ? Carub.0001s1782 Secondary Identifier:  ? PAC:39227656
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1782 0.5kb upstream 0.5kb upstream 3179 true scaffold_1: 6274436-6277614 Capsella rubella
Carub.0001s1782 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6274436-6274935 Capsella rubella
Carub.0001s1782 0.5kb downstream 0.5kb downstream 3179 true scaffold_1: 6274936-6278114 Capsella rubella
Carub.0001s1782 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6277615-6278114 Capsella rubella
Carub.0001s1782 1.0kb upstream 1.0kb upstream 3679 true scaffold_1: 6273936-6277614 Capsella rubella
Carub.0001s1782 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6273936-6274935 Capsella rubella
Carub.0001s1782 1.0kb downstream 1.0kb downstream 3679 true scaffold_1: 6274936-6278614 Capsella rubella
Carub.0001s1782 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6277615-6278614 Capsella rubella
Carub.0001s1782 2.0kb upstream 2.0kb upstream 4679 true scaffold_1: 6272936-6277614 Capsella rubella
Carub.0001s1782 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6272936-6274935 Capsella rubella
Carub.0001s1782 2.0kb downstream 2.0kb downstream 4679 true scaffold_1: 6274936-6279614 Capsella rubella
Carub.0001s1782 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6277615-6279614 Capsella rubella
Carub.0001s1782 5.0kb upstream 5.0kb upstream 7679 true scaffold_1: 6269936-6277614 Capsella rubella
Carub.0001s1782 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6269936-6274935 Capsella rubella
Carub.0001s1782 5.0kb downstream 5.0kb downstream 7679 true scaffold_1: 6274936-6282614 Capsella rubella
Carub.0001s1782 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6277615-6282614 Capsella rubella
Carub.0001s1782 10.0kb upstream 10.0kb upstream 12679 true scaffold_1: 6264936-6277614 Capsella rubella
Carub.0001s1782 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6264936-6274935 Capsella rubella
Carub.0001s1782 10.0kb downstream 10.0kb downstream 12679 true scaffold_1: 6274936-6287614 Capsella rubella
Carub.0001s1782 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6277615-6287614 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362895 5261 Brassicaceae View MSA
123841195 5264 Brassicales-Malvales View MSA
124344974 5266 SBM View MSA
124242934 5268 Malvidae View MSA
124062787 5270 Rosid View MSA
123741182 5271 Pentapetalae View MSA
122795415 5272 Eudicot View MSA
122047658 5273 Angiosperm View MSA
123429173 5275 Viridiplantae View MSA
121351590 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain