Gene : Carub.0001s1645 C. rubella v1.1
Defline:  (1 of 1) PF00569//PF00628//PF02135//PF08214 - Zinc finger, ZZ type (ZZ) // PHD-finger (PHD) // TAZ zinc finger (zf-TAZ) // Histone acetylation protein (HAT_KAT11) Genomic Order:  1645
Name:  ? Carub.0001s1645 Secondary Identifier:  ? PAC:39230468
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1645 0.5kb upstream 0.5kb upstream 9243 true scaffold_1: 5776773-5786015 Capsella rubella
Carub.0001s1645 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5776773-5777272 Capsella rubella
Carub.0001s1645 0.5kb downstream 0.5kb downstream 9243 true scaffold_1: 5777273-5786515 Capsella rubella
Carub.0001s1645 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5786016-5786515 Capsella rubella
Carub.0001s1645 1.0kb upstream 1.0kb upstream 9743 true scaffold_1: 5776273-5786015 Capsella rubella
Carub.0001s1645 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5776273-5777272 Capsella rubella
Carub.0001s1645 1.0kb downstream 1.0kb downstream 9743 true scaffold_1: 5777273-5787015 Capsella rubella
Carub.0001s1645 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5786016-5787015 Capsella rubella
Carub.0001s1645 2.0kb upstream 2.0kb upstream 10743 true scaffold_1: 5775273-5786015 Capsella rubella
Carub.0001s1645 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5775273-5777272 Capsella rubella
Carub.0001s1645 2.0kb downstream 2.0kb downstream 10743 true scaffold_1: 5777273-5788015 Capsella rubella
Carub.0001s1645 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5786016-5788015 Capsella rubella
Carub.0001s1645 5.0kb upstream 5.0kb upstream 13743 true scaffold_1: 5772273-5786015 Capsella rubella
Carub.0001s1645 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5772273-5777272 Capsella rubella
Carub.0001s1645 5.0kb downstream 5.0kb downstream 13743 true scaffold_1: 5777273-5791015 Capsella rubella
Carub.0001s1645 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5786016-5791015 Capsella rubella
Carub.0001s1645 10.0kb upstream 10.0kb upstream 18743 true scaffold_1: 5767273-5786015 Capsella rubella
Carub.0001s1645 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5767273-5777272 Capsella rubella
Carub.0001s1645 10.0kb downstream 10.0kb downstream 18743 true scaffold_1: 5777273-5796015 Capsella rubella
Carub.0001s1645 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5786016-5796015 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369482 5261 Brassicaceae View MSA
123839846 5264 Brassicales-Malvales View MSA
124344458 5266 SBM View MSA
124238296 5268 Malvidae View MSA
124067227 5270 Rosid View MSA
123747259 5271 Pentapetalae View MSA
122789535 5272 Eudicot View MSA
122047201 5273 Angiosperm View MSA
121350917 5274 Embryophyte View MSA
123426645 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain