Gene : Carub.0001s1686 C. rubella v1.1
Defline:  (1 of 4) PTHR12111:SF1 - COILED-COIL DOMAIN-CONTAINING PROTEIN 94 Genomic Order:  1686
Name:  ? Carub.0001s1686 Secondary Identifier:  ? PAC:39231179
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1686 0.5kb upstream 0.5kb upstream 2886 true scaffold_1: 5907636-5910521 Capsella rubella
Carub.0001s1686 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5907636-5908135 Capsella rubella
Carub.0001s1686 0.5kb downstream 0.5kb downstream 2886 true scaffold_1: 5908136-5911021 Capsella rubella
Carub.0001s1686 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5910522-5911021 Capsella rubella
Carub.0001s1686 1.0kb upstream 1.0kb upstream 3386 true scaffold_1: 5907136-5910521 Capsella rubella
Carub.0001s1686 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5907136-5908135 Capsella rubella
Carub.0001s1686 1.0kb downstream 1.0kb downstream 3386 true scaffold_1: 5908136-5911521 Capsella rubella
Carub.0001s1686 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5910522-5911521 Capsella rubella
Carub.0001s1686 2.0kb upstream 2.0kb upstream 4386 true scaffold_1: 5906136-5910521 Capsella rubella
Carub.0001s1686 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5906136-5908135 Capsella rubella
Carub.0001s1686 2.0kb downstream 2.0kb downstream 4386 true scaffold_1: 5908136-5912521 Capsella rubella
Carub.0001s1686 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5910522-5912521 Capsella rubella
Carub.0001s1686 5.0kb upstream 5.0kb upstream 7386 true scaffold_1: 5903136-5910521 Capsella rubella
Carub.0001s1686 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5903136-5908135 Capsella rubella
Carub.0001s1686 5.0kb downstream 5.0kb downstream 7386 true scaffold_1: 5908136-5915521 Capsella rubella
Carub.0001s1686 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5910522-5915521 Capsella rubella
Carub.0001s1686 10.0kb upstream 10.0kb upstream 12386 true scaffold_1: 5898136-5910521 Capsella rubella
Carub.0001s1686 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5898136-5908135 Capsella rubella
Carub.0001s1686 10.0kb downstream 10.0kb downstream 12386 true scaffold_1: 5908136-5920521 Capsella rubella
Carub.0001s1686 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5910522-5920521 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373596 5261 Brassicaceae View MSA
123838587 5264 Brassicales-Malvales View MSA
124341013 5266 SBM View MSA
124242173 5268 Malvidae View MSA
124050319 5270 Rosid View MSA
123737924 5271 Pentapetalae View MSA
122790079 5272 Eudicot View MSA
122042310 5273 Angiosperm View MSA
121344550 5274 Embryophyte View MSA
123428869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain