Gene : Carub.0001s1707 C. rubella v1.1
Defline:  (1 of 6) PTHR11945//PTHR11945:SF204 - MADS BOX PROTEIN // F21D18.12-RELATED Genomic Order:  1707
Name:  ? Carub.0001s1707 Secondary Identifier:  ? PAC:39229237
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1707 0.5kb upstream 0.5kb upstream 1151 true scaffold_1: 5978893-5980043 Capsella rubella
Carub.0001s1707 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5979544-5980043 Capsella rubella
Carub.0001s1707 0.5kb downstream 0.5kb downstream 1151 true scaffold_1: 5978393-5979543 Capsella rubella
Carub.0001s1707 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5978393-5978892 Capsella rubella
Carub.0001s1707 1.0kb upstream 1.0kb upstream 1651 true scaffold_1: 5978893-5980543 Capsella rubella
Carub.0001s1707 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5979544-5980543 Capsella rubella
Carub.0001s1707 1.0kb downstream 1.0kb downstream 1651 true scaffold_1: 5977893-5979543 Capsella rubella
Carub.0001s1707 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5977893-5978892 Capsella rubella
Carub.0001s1707 2.0kb upstream 2.0kb upstream 2651 true scaffold_1: 5978893-5981543 Capsella rubella
Carub.0001s1707 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5979544-5981543 Capsella rubella
Carub.0001s1707 2.0kb downstream 2.0kb downstream 2651 true scaffold_1: 5976893-5979543 Capsella rubella
Carub.0001s1707 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5976893-5978892 Capsella rubella
Carub.0001s1707 5.0kb upstream 5.0kb upstream 5651 true scaffold_1: 5978893-5984543 Capsella rubella
Carub.0001s1707 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5979544-5984543 Capsella rubella
Carub.0001s1707 5.0kb downstream 5.0kb downstream 5651 true scaffold_1: 5973893-5979543 Capsella rubella
Carub.0001s1707 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5973893-5978892 Capsella rubella
Carub.0001s1707 10.0kb upstream 10.0kb upstream 10651 true scaffold_1: 5978893-5989543 Capsella rubella
Carub.0001s1707 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5979544-5989543 Capsella rubella
Carub.0001s1707 10.0kb downstream 10.0kb downstream 10651 true scaffold_1: 5968893-5979543 Capsella rubella
Carub.0001s1707 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5968893-5978892 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368122 5261 Brassicaceae View MSA
123839755 5264 Brassicales-Malvales View MSA
124344954 5266 SBM View MSA
124246332 5268 Malvidae View MSA
124075331 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain