Gene : Carub.0006s0045 C. rubella v1.1
Defline:  (1 of 2) PTHR35499//PTHR35499:SF2 - FAMILY NOT NAMED // ALC-INTERACTING PROTEIN 1 Genomic Order:  45
Name:  ? Carub.0006s0045 Secondary Identifier:  ? PAC:39248147
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0045 0.5kb upstream 0.5kb upstream 2289 true scaffold_6: 159829-162117 Capsella rubella
Carub.0006s0045 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 161618-162117 Capsella rubella
Carub.0006s0045 0.5kb downstream 0.5kb downstream 2289 true scaffold_6: 159329-161617 Capsella rubella
Carub.0006s0045 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 159329-159828 Capsella rubella
Carub.0006s0045 1.0kb upstream 1.0kb upstream 2789 true scaffold_6: 159829-162617 Capsella rubella
Carub.0006s0045 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 161618-162617 Capsella rubella
Carub.0006s0045 1.0kb downstream 1.0kb downstream 2789 true scaffold_6: 158829-161617 Capsella rubella
Carub.0006s0045 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 158829-159828 Capsella rubella
Carub.0006s0045 2.0kb upstream 2.0kb upstream 3789 true scaffold_6: 159829-163617 Capsella rubella
Carub.0006s0045 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 161618-163617 Capsella rubella
Carub.0006s0045 2.0kb downstream 2.0kb downstream 3789 true scaffold_6: 157829-161617 Capsella rubella
Carub.0006s0045 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 157829-159828 Capsella rubella
Carub.0006s0045 5.0kb upstream 5.0kb upstream 6789 true scaffold_6: 159829-166617 Capsella rubella
Carub.0006s0045 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 161618-166617 Capsella rubella
Carub.0006s0045 5.0kb downstream 5.0kb downstream 6789 true scaffold_6: 154829-161617 Capsella rubella
Carub.0006s0045 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 154829-159828 Capsella rubella
Carub.0006s0045 10.0kb upstream 10.0kb upstream 11789 true scaffold_6: 159829-171617 Capsella rubella
Carub.0006s0045 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 161618-171617 Capsella rubella
Carub.0006s0045 10.0kb downstream 10.0kb downstream 11789 true scaffold_6: 149829-161617 Capsella rubella
Carub.0006s0045 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 149829-159828 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369905 5261 Brassicaceae View MSA
123835053 5264 Brassicales-Malvales View MSA
124339401 5266 SBM View MSA
124253688 5268 Malvidae View MSA
124062218 5270 Rosid View MSA
123751087 5271 Pentapetalae View MSA
122789400 5272 Eudicot View MSA
122050315 5273 Angiosperm View MSA
121311850 5274 Embryophyte View MSA
123349090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain