Gene : Carub.0001s1609 C. rubella v1.1
Defline:  (1 of 2) 1.1.1.205 - IMP dehydrogenase / Inosinic acid dehydrogenase Genomic Order:  1609
Name:  ? Carub.0001s1609 Secondary Identifier:  ? PAC:39227235
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5695 Capsella rubella pathologic  
Crubella PWY-6596 Capsella rubella pathologic  
Crubella PWY-7221 Capsella rubella pathologic  
Crubella PWY-7228 Capsella rubella pathologic  
Crubella PWY-841 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1609 0.5kb upstream 0.5kb upstream 2762 true scaffold_1: 5649888-5652649 Capsella rubella
Carub.0001s1609 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5649888-5650387 Capsella rubella
Carub.0001s1609 0.5kb downstream 0.5kb downstream 2762 true scaffold_1: 5650388-5653149 Capsella rubella
Carub.0001s1609 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5652650-5653149 Capsella rubella
Carub.0001s1609 1.0kb upstream 1.0kb upstream 3262 true scaffold_1: 5649388-5652649 Capsella rubella
Carub.0001s1609 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5649388-5650387 Capsella rubella
Carub.0001s1609 1.0kb downstream 1.0kb downstream 3262 true scaffold_1: 5650388-5653649 Capsella rubella
Carub.0001s1609 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5652650-5653649 Capsella rubella
Carub.0001s1609 2.0kb upstream 2.0kb upstream 4262 true scaffold_1: 5648388-5652649 Capsella rubella
Carub.0001s1609 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5648388-5650387 Capsella rubella
Carub.0001s1609 2.0kb downstream 2.0kb downstream 4262 true scaffold_1: 5650388-5654649 Capsella rubella
Carub.0001s1609 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5652650-5654649 Capsella rubella
Carub.0001s1609 5.0kb upstream 5.0kb upstream 7262 true scaffold_1: 5645388-5652649 Capsella rubella
Carub.0001s1609 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5645388-5650387 Capsella rubella
Carub.0001s1609 5.0kb downstream 5.0kb downstream 7262 true scaffold_1: 5650388-5657649 Capsella rubella
Carub.0001s1609 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5652650-5657649 Capsella rubella
Carub.0001s1609 10.0kb upstream 10.0kb upstream 12262 true scaffold_1: 5640388-5652649 Capsella rubella
Carub.0001s1609 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5640388-5650387 Capsella rubella
Carub.0001s1609 10.0kb downstream 10.0kb downstream 12262 true scaffold_1: 5650388-5662649 Capsella rubella
Carub.0001s1609 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5652650-5662649 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373869 5261 Brassicaceae View MSA
123828071 5264 Brassicales-Malvales View MSA
124336978 5266 SBM View MSA
124244114 5268 Malvidae View MSA
124063330 5270 Rosid View MSA
123738043 5271 Pentapetalae View MSA
122797755 5272 Eudicot View MSA
122042253 5273 Angiosperm View MSA
121346920 5274 Embryophyte View MSA
123424189 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain