Gene : Carub.0001s1837 C. rubella v1.1

Defline:  (1 of 2) KOG3292 - Predicted membrane protein Genomic Order:  1837
Name:  ? Carub.0001s1837 Secondary Identifier:  ? PAC:39228306

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1837 0.5kb upstream 0.5kb upstream 2271 true scaffold_1: 6499909-6502179 Capsella rubella
Carub.0001s1837 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6501680-6502179 Capsella rubella
Carub.0001s1837 0.5kb downstream 0.5kb downstream 2271 true scaffold_1: 6499409-6501679 Capsella rubella
Carub.0001s1837 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6499409-6499908 Capsella rubella
Carub.0001s1837 1.0kb upstream 1.0kb upstream 2771 true scaffold_1: 6499909-6502679 Capsella rubella
Carub.0001s1837 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6501680-6502679 Capsella rubella
Carub.0001s1837 1.0kb downstream 1.0kb downstream 2771 true scaffold_1: 6498909-6501679 Capsella rubella
Carub.0001s1837 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6498909-6499908 Capsella rubella
Carub.0001s1837 2.0kb upstream 2.0kb upstream 3771 true scaffold_1: 6499909-6503679 Capsella rubella
Carub.0001s1837 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6501680-6503679 Capsella rubella
Carub.0001s1837 2.0kb downstream 2.0kb downstream 3771 true scaffold_1: 6497909-6501679 Capsella rubella
Carub.0001s1837 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6497909-6499908 Capsella rubella
Carub.0001s1837 5.0kb upstream 5.0kb upstream 6771 true scaffold_1: 6499909-6506679 Capsella rubella
Carub.0001s1837 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6501680-6506679 Capsella rubella
Carub.0001s1837 5.0kb downstream 5.0kb downstream 6771 true scaffold_1: 6494909-6501679 Capsella rubella
Carub.0001s1837 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6494909-6499908 Capsella rubella
Carub.0001s1837 10.0kb upstream 10.0kb upstream 11771 true scaffold_1: 6499909-6511679 Capsella rubella
Carub.0001s1837 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6501680-6511679 Capsella rubella
Carub.0001s1837 10.0kb downstream 10.0kb downstream 11771 true scaffold_1: 6489909-6501679 Capsella rubella
Carub.0001s1837 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6489909-6499908 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026462 5273 Angiosperm View MSA
122376216 5261 Brassicaceae View MSA
123832852 5264 Brassicales-Malvales View MSA
124346903 5266 SBM View MSA
124248288 5268 Malvidae View MSA
124067528 5270 Rosid View MSA
123743297 5271 Pentapetalae View MSA
122787099 5272 Eudicot View MSA
121347335 5274 Embryophyte View MSA
123428191 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain