Gene : Carub.0001s1840 C. rubella v1.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED Genomic Order:  1840
Name:  ? Carub.0001s1840 Secondary Identifier:  ? PAC:39228371
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1840 0.5kb upstream 0.5kb upstream 3881 true scaffold_1: 6507613-6511493 Capsella rubella
Carub.0001s1840 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6507613-6508112 Capsella rubella
Carub.0001s1840 0.5kb downstream 0.5kb downstream 3881 true scaffold_1: 6508113-6511993 Capsella rubella
Carub.0001s1840 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6511494-6511993 Capsella rubella
Carub.0001s1840 1.0kb upstream 1.0kb upstream 4381 true scaffold_1: 6507113-6511493 Capsella rubella
Carub.0001s1840 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6507113-6508112 Capsella rubella
Carub.0001s1840 1.0kb downstream 1.0kb downstream 4381 true scaffold_1: 6508113-6512493 Capsella rubella
Carub.0001s1840 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6511494-6512493 Capsella rubella
Carub.0001s1840 2.0kb upstream 2.0kb upstream 5381 true scaffold_1: 6506113-6511493 Capsella rubella
Carub.0001s1840 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6506113-6508112 Capsella rubella
Carub.0001s1840 2.0kb downstream 2.0kb downstream 5381 true scaffold_1: 6508113-6513493 Capsella rubella
Carub.0001s1840 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6511494-6513493 Capsella rubella
Carub.0001s1840 5.0kb upstream 5.0kb upstream 8381 true scaffold_1: 6503113-6511493 Capsella rubella
Carub.0001s1840 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6503113-6508112 Capsella rubella
Carub.0001s1840 5.0kb downstream 5.0kb downstream 8381 true scaffold_1: 6508113-6516493 Capsella rubella
Carub.0001s1840 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6511494-6516493 Capsella rubella
Carub.0001s1840 10.0kb upstream 10.0kb upstream 13381 true scaffold_1: 6498113-6511493 Capsella rubella
Carub.0001s1840 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6498113-6508112 Capsella rubella
Carub.0001s1840 10.0kb downstream 10.0kb downstream 13381 true scaffold_1: 6508113-6521493 Capsella rubella
Carub.0001s1840 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6511494-6521493 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365695 5261 Brassicaceae View MSA
123827754 5264 Brassicales-Malvales View MSA
124351043 5266 SBM View MSA
124244447 5268 Malvidae View MSA
124062317 5270 Rosid View MSA
123742642 5271 Pentapetalae View MSA
122791202 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain