Gene : Carub.0001s3948 C. rubella v1.1
Defline:  (1 of 3) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED Genomic Order:  3948
Name:  ? Carub.0001s3948 Secondary Identifier:  ? PAC:39231330
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3948 0.5kb upstream 0.5kb upstream 6075 true scaffold_1: 17398064-17404138 Capsella rubella
Carub.0001s3948 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17398064-17398563 Capsella rubella
Carub.0001s3948 0.5kb downstream 0.5kb downstream 6075 true scaffold_1: 17398564-17404638 Capsella rubella
Carub.0001s3948 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17404139-17404638 Capsella rubella
Carub.0001s3948 1.0kb upstream 1.0kb upstream 6575 true scaffold_1: 17397564-17404138 Capsella rubella
Carub.0001s3948 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17397564-17398563 Capsella rubella
Carub.0001s3948 1.0kb downstream 1.0kb downstream 6575 true scaffold_1: 17398564-17405138 Capsella rubella
Carub.0001s3948 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17404139-17405138 Capsella rubella
Carub.0001s3948 2.0kb upstream 2.0kb upstream 7575 true scaffold_1: 17396564-17404138 Capsella rubella
Carub.0001s3948 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17396564-17398563 Capsella rubella
Carub.0001s3948 2.0kb downstream 2.0kb downstream 7575 true scaffold_1: 17398564-17406138 Capsella rubella
Carub.0001s3948 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17404139-17406138 Capsella rubella
Carub.0001s3948 5.0kb upstream 5.0kb upstream 10575 true scaffold_1: 17393564-17404138 Capsella rubella
Carub.0001s3948 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17393564-17398563 Capsella rubella
Carub.0001s3948 5.0kb downstream 5.0kb downstream 10575 true scaffold_1: 17398564-17409138 Capsella rubella
Carub.0001s3948 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17404139-17409138 Capsella rubella
Carub.0001s3948 10.0kb upstream 10.0kb upstream 15575 true scaffold_1: 17388564-17404138 Capsella rubella
Carub.0001s3948 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17388564-17398563 Capsella rubella
Carub.0001s3948 10.0kb downstream 10.0kb downstream 15575 true scaffold_1: 17398564-17414138 Capsella rubella
Carub.0001s3948 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17404139-17414138 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373009 5261 Brassicaceae View MSA
123829354 5264 Brassicales-Malvales View MSA
124341270 5266 SBM View MSA
124253553 5268 Malvidae View MSA
124061950 5270 Rosid View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain