Gene : Carub.0001s3478 C. rubella v1.1
Defline:  (1 of 1) PTHR31155//PTHR31155:SF3 - ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED // ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 6, CHLOROPLASTIC Genomic Order:  3478
Name:  ? Carub.0001s3478 Secondary Identifier:  ? PAC:39227506
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5147 Capsella rubella pathologic  
Crubella PWY-5156 Capsella rubella pathologic  
Crubella PWY-5366 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3478 0.5kb upstream 0.5kb upstream 2636 true scaffold_1: 14961611-14964246 Capsella rubella
Carub.0001s3478 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14961611-14962110 Capsella rubella
Carub.0001s3478 0.5kb downstream 0.5kb downstream 2636 true scaffold_1: 14962111-14964746 Capsella rubella
Carub.0001s3478 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14964247-14964746 Capsella rubella
Carub.0001s3478 1.0kb upstream 1.0kb upstream 3136 true scaffold_1: 14961111-14964246 Capsella rubella
Carub.0001s3478 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14961111-14962110 Capsella rubella
Carub.0001s3478 1.0kb downstream 1.0kb downstream 3136 true scaffold_1: 14962111-14965246 Capsella rubella
Carub.0001s3478 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14964247-14965246 Capsella rubella
Carub.0001s3478 2.0kb upstream 2.0kb upstream 4136 true scaffold_1: 14960111-14964246 Capsella rubella
Carub.0001s3478 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14960111-14962110 Capsella rubella
Carub.0001s3478 2.0kb downstream 2.0kb downstream 4136 true scaffold_1: 14962111-14966246 Capsella rubella
Carub.0001s3478 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14964247-14966246 Capsella rubella
Carub.0001s3478 5.0kb upstream 5.0kb upstream 7136 true scaffold_1: 14957111-14964246 Capsella rubella
Carub.0001s3478 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14957111-14962110 Capsella rubella
Carub.0001s3478 5.0kb downstream 5.0kb downstream 7136 true scaffold_1: 14962111-14969246 Capsella rubella
Carub.0001s3478 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14964247-14969246 Capsella rubella
Carub.0001s3478 10.0kb upstream 10.0kb upstream 12136 true scaffold_1: 14952111-14964246 Capsella rubella
Carub.0001s3478 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14952111-14962110 Capsella rubella
Carub.0001s3478 10.0kb downstream 10.0kb downstream 12136 true scaffold_1: 14962111-14974246 Capsella rubella
Carub.0001s3478 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14964247-14974246 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026445 5273 Angiosperm View MSA
122343462 5261 Brassicaceae View MSA
123828541 5264 Brassicales-Malvales View MSA
124337007 5266 SBM View MSA
124237804 5268 Malvidae View MSA
124066953 5270 Rosid View MSA
123741876 5271 Pentapetalae View MSA
122770152 5272 Eudicot View MSA
121296333 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain