Gene : Carub.0001s3314 C. rubella v1.1

Defline:  (1 of 3) PTHR10641//PTHR10641:SF643 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB TRANSCRIPTION FACTOR-RELATED Genomic Order:  3314
Name:  ? Carub.0001s3314 Secondary Identifier:  ? PAC:39227278

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3314 0.5kb upstream 0.5kb upstream 1475 true scaffold_1: 12532294-12533768 Capsella rubella
Carub.0001s3314 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 12532294-12532793 Capsella rubella
Carub.0001s3314 0.5kb downstream 0.5kb downstream 1475 true scaffold_1: 12532794-12534268 Capsella rubella
Carub.0001s3314 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 12533769-12534268 Capsella rubella
Carub.0001s3314 1.0kb upstream 1.0kb upstream 1975 true scaffold_1: 12531794-12533768 Capsella rubella
Carub.0001s3314 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 12531794-12532793 Capsella rubella
Carub.0001s3314 1.0kb downstream 1.0kb downstream 1975 true scaffold_1: 12532794-12534768 Capsella rubella
Carub.0001s3314 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 12533769-12534768 Capsella rubella
Carub.0001s3314 2.0kb upstream 2.0kb upstream 2975 true scaffold_1: 12530794-12533768 Capsella rubella
Carub.0001s3314 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 12530794-12532793 Capsella rubella
Carub.0001s3314 2.0kb downstream 2.0kb downstream 2975 true scaffold_1: 12532794-12535768 Capsella rubella
Carub.0001s3314 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 12533769-12535768 Capsella rubella
Carub.0001s3314 5.0kb upstream 5.0kb upstream 5975 true scaffold_1: 12527794-12533768 Capsella rubella
Carub.0001s3314 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 12527794-12532793 Capsella rubella
Carub.0001s3314 5.0kb downstream 5.0kb downstream 5975 true scaffold_1: 12532794-12538768 Capsella rubella
Carub.0001s3314 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 12533769-12538768 Capsella rubella
Carub.0001s3314 10.0kb upstream 10.0kb upstream 10975 true scaffold_1: 12522794-12533768 Capsella rubella
Carub.0001s3314 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 12522794-12532793 Capsella rubella
Carub.0001s3314 10.0kb downstream 10.0kb downstream 10975 true scaffold_1: 12532794-12543768 Capsella rubella
Carub.0001s3314 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 12533769-12543768 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377670 5261 Brassicaceae View MSA
123837578 5264 Brassicales-Malvales View MSA
124336622 5266 SBM View MSA
124237114 5268 Malvidae View MSA
124071015 5270 Rosid View MSA
123750184 5271 Pentapetalae View MSA
122796704 5272 Eudicot View MSA
122049287 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121351179 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain