Gene : Carub.0001s3624 C. rubella v1.1
Defline:  (1 of 4) PTHR23024//PTHR23024:SF131 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // CARBOXYLESTERASE 2-RELATED Genomic Order:  3624
Name:  ? Carub.0001s3624 Secondary Identifier:  ? PAC:39229592
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6303 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3624 0.5kb upstream 0.5kb upstream 2200 true scaffold_1: 15879317-15881516 Capsella rubella
Carub.0001s3624 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15879317-15879816 Capsella rubella
Carub.0001s3624 0.5kb downstream 0.5kb downstream 2200 true scaffold_1: 15879817-15882016 Capsella rubella
Carub.0001s3624 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15881517-15882016 Capsella rubella
Carub.0001s3624 1.0kb upstream 1.0kb upstream 2700 true scaffold_1: 15878817-15881516 Capsella rubella
Carub.0001s3624 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15878817-15879816 Capsella rubella
Carub.0001s3624 1.0kb downstream 1.0kb downstream 2700 true scaffold_1: 15879817-15882516 Capsella rubella
Carub.0001s3624 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15881517-15882516 Capsella rubella
Carub.0001s3624 2.0kb upstream 2.0kb upstream 3700 true scaffold_1: 15877817-15881516 Capsella rubella
Carub.0001s3624 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15877817-15879816 Capsella rubella
Carub.0001s3624 2.0kb downstream 2.0kb downstream 3700 true scaffold_1: 15879817-15883516 Capsella rubella
Carub.0001s3624 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15881517-15883516 Capsella rubella
Carub.0001s3624 5.0kb upstream 5.0kb upstream 6700 true scaffold_1: 15874817-15881516 Capsella rubella
Carub.0001s3624 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15874817-15879816 Capsella rubella
Carub.0001s3624 5.0kb downstream 5.0kb downstream 6700 true scaffold_1: 15879817-15886516 Capsella rubella
Carub.0001s3624 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15881517-15886516 Capsella rubella
Carub.0001s3624 10.0kb upstream 10.0kb upstream 11700 true scaffold_1: 15869817-15881516 Capsella rubella
Carub.0001s3624 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15869817-15879816 Capsella rubella
Carub.0001s3624 10.0kb downstream 10.0kb downstream 11700 true scaffold_1: 15879817-15891516 Capsella rubella
Carub.0001s3624 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15881517-15891516 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362057 5261 Brassicaceae View MSA
123831914 5264 Brassicales-Malvales View MSA
124321756 5266 SBM View MSA
124253655 5268 Malvidae View MSA
124068303 5270 Rosid View MSA
123751829 5271 Pentapetalae View MSA
122797555 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain