Gene : Carub.0001s3639 C. rubella v1.1

Genomic Order:  3639 Name:  ? Carub.0001s3639
Secondary Identifier:  ? PAC:39230153

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3639 0.5kb upstream 0.5kb upstream 785 true scaffold_1: 15971256-15972040 Capsella rubella
Carub.0001s3639 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15971541-15972040 Capsella rubella
Carub.0001s3639 0.5kb downstream 0.5kb downstream 785 true scaffold_1: 15970756-15971540 Capsella rubella
Carub.0001s3639 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15970756-15971255 Capsella rubella
Carub.0001s3639 1.0kb upstream 1.0kb upstream 1285 true scaffold_1: 15971256-15972540 Capsella rubella
Carub.0001s3639 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15971541-15972540 Capsella rubella
Carub.0001s3639 1.0kb downstream 1.0kb downstream 1285 true scaffold_1: 15970256-15971540 Capsella rubella
Carub.0001s3639 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15970256-15971255 Capsella rubella
Carub.0001s3639 2.0kb upstream 2.0kb upstream 2285 true scaffold_1: 15971256-15973540 Capsella rubella
Carub.0001s3639 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15971541-15973540 Capsella rubella
Carub.0001s3639 2.0kb downstream 2.0kb downstream 2285 true scaffold_1: 15969256-15971540 Capsella rubella
Carub.0001s3639 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15969256-15971255 Capsella rubella
Carub.0001s3639 5.0kb upstream 5.0kb upstream 5285 true scaffold_1: 15971256-15976540 Capsella rubella
Carub.0001s3639 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15971541-15976540 Capsella rubella
Carub.0001s3639 5.0kb downstream 5.0kb downstream 5285 true scaffold_1: 15966256-15971540 Capsella rubella
Carub.0001s3639 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15966256-15971255 Capsella rubella
Carub.0001s3639 10.0kb upstream 10.0kb upstream 10285 true scaffold_1: 15971256-15981540 Capsella rubella
Carub.0001s3639 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15971541-15981540 Capsella rubella
Carub.0001s3639 10.0kb downstream 10.0kb downstream 10285 true scaffold_1: 15961256-15971540 Capsella rubella
Carub.0001s3639 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15961256-15971255 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367290 5261 Brassicaceae View MSA
123832497 5264 Brassicales-Malvales View MSA
124348173 5266 SBM View MSA
124237873 5268 Malvidae View MSA
124071764 5270 Rosid View MSA
123744077 5271 Pentapetalae View MSA
122789232 5272 Eudicot View MSA
122050184 5273 Angiosperm View MSA
121311784 5274 Embryophyte View MSA
123349033 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain