Gene : Carub.0001s3642 C. rubella v1.1
Defline:  (1 of 1) PTHR12869//PTHR12869:SF0 - SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN // TRANSMEMBRANE PROTEIN 147 Genomic Order:  3642
Name:  ? Carub.0001s3642 Secondary Identifier:  ? PAC:39229093
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3642 0.5kb upstream 0.5kb upstream 2416 true scaffold_1: 15979882-15982297 Capsella rubella
Carub.0001s3642 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15981798-15982297 Capsella rubella
Carub.0001s3642 0.5kb downstream 0.5kb downstream 2416 true scaffold_1: 15979382-15981797 Capsella rubella
Carub.0001s3642 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15979382-15979881 Capsella rubella
Carub.0001s3642 1.0kb upstream 1.0kb upstream 2916 true scaffold_1: 15979882-15982797 Capsella rubella
Carub.0001s3642 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15981798-15982797 Capsella rubella
Carub.0001s3642 1.0kb downstream 1.0kb downstream 2916 true scaffold_1: 15978882-15981797 Capsella rubella
Carub.0001s3642 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15978882-15979881 Capsella rubella
Carub.0001s3642 2.0kb upstream 2.0kb upstream 3916 true scaffold_1: 15979882-15983797 Capsella rubella
Carub.0001s3642 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15981798-15983797 Capsella rubella
Carub.0001s3642 2.0kb downstream 2.0kb downstream 3916 true scaffold_1: 15977882-15981797 Capsella rubella
Carub.0001s3642 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15977882-15979881 Capsella rubella
Carub.0001s3642 5.0kb upstream 5.0kb upstream 6916 true scaffold_1: 15979882-15986797 Capsella rubella
Carub.0001s3642 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15981798-15986797 Capsella rubella
Carub.0001s3642 5.0kb downstream 5.0kb downstream 6916 true scaffold_1: 15974882-15981797 Capsella rubella
Carub.0001s3642 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15974882-15979881 Capsella rubella
Carub.0001s3642 10.0kb upstream 10.0kb upstream 11916 true scaffold_1: 15979882-15991797 Capsella rubella
Carub.0001s3642 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15981798-15991797 Capsella rubella
Carub.0001s3642 10.0kb downstream 10.0kb downstream 11916 true scaffold_1: 15969882-15981797 Capsella rubella
Carub.0001s3642 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15969882-15979881 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361713 5261 Brassicaceae View MSA
123827966 5264 Brassicales-Malvales View MSA
124343193 5266 SBM View MSA
124252874 5268 Malvidae View MSA
124064823 5270 Rosid View MSA
123746245 5271 Pentapetalae View MSA
122789833 5272 Eudicot View MSA
122046816 5273 Angiosperm View MSA
121343820 5274 Embryophyte View MSA
123379923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain