Gene : Carub.0001s3398 C. rubella v1.1
Defline:  (1 of 37) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Genomic Order:  3398
Name:  ? Carub.0001s3398 Secondary Identifier:  ? PAC:39231427
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3398 0.5kb upstream 0.5kb upstream 3392 true scaffold_1: 13596505-13599896 Capsella rubella
Carub.0001s3398 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 13596505-13597004 Capsella rubella
Carub.0001s3398 0.5kb downstream 0.5kb downstream 3392 true scaffold_1: 13597005-13600396 Capsella rubella
Carub.0001s3398 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 13599897-13600396 Capsella rubella
Carub.0001s3398 1.0kb upstream 1.0kb upstream 3892 true scaffold_1: 13596005-13599896 Capsella rubella
Carub.0001s3398 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 13596005-13597004 Capsella rubella
Carub.0001s3398 1.0kb downstream 1.0kb downstream 3892 true scaffold_1: 13597005-13600896 Capsella rubella
Carub.0001s3398 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 13599897-13600896 Capsella rubella
Carub.0001s3398 2.0kb upstream 2.0kb upstream 4892 true scaffold_1: 13595005-13599896 Capsella rubella
Carub.0001s3398 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 13595005-13597004 Capsella rubella
Carub.0001s3398 2.0kb downstream 2.0kb downstream 4892 true scaffold_1: 13597005-13601896 Capsella rubella
Carub.0001s3398 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 13599897-13601896 Capsella rubella
Carub.0001s3398 5.0kb upstream 5.0kb upstream 7892 true scaffold_1: 13592005-13599896 Capsella rubella
Carub.0001s3398 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 13592005-13597004 Capsella rubella
Carub.0001s3398 5.0kb downstream 5.0kb downstream 7892 true scaffold_1: 13597005-13604896 Capsella rubella
Carub.0001s3398 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 13599897-13604896 Capsella rubella
Carub.0001s3398 10.0kb upstream 10.0kb upstream 12892 true scaffold_1: 13587005-13599896 Capsella rubella
Carub.0001s3398 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 13587005-13597004 Capsella rubella
Carub.0001s3398 10.0kb downstream 10.0kb downstream 12892 true scaffold_1: 13597005-13609896 Capsella rubella
Carub.0001s3398 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 13599897-13609896 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122338917 5261 Brassicaceae View MSA
123779436 5264 Brassicales-Malvales View MSA
124277760 5266 SBM View MSA
124132928 5268 Malvidae View MSA
124073687 5270 Rosid View MSA
123753150 5271 Pentapetalae View MSA
122797947 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain